RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MYOZ2Q9NPC6 264 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 XPNPEP1Q9NQW7 623 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 DYRK4Q9NR20 520 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 THUMPD1Q9NXG2 353 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 TAS2R9Q9NYW1 312 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KIAA1456Q9P272 454 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 MRM2Q9UI43 246 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 ZNF639Q9UID6 485 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PHF11Q9UIL8 331 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 HACL1Q9UJ83 578 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PITPNC1Q9UKF7 332 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 IKZF3Q9UKT9 509 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CLEC4EQ9ULY5 219 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 OAZ3Q9UMX2 235 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KCNJ14Q9UNX9 436 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 B9D1Q9UPM9 204 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 USP22Q9UPT9 525 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 FOXJ3Q9UPW0 622 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 VWA7Q9Y334 891 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 NR2E1Q9Y466 385 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 HEY1Q9Y5J3 304 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 WIF1Q9Y5W5 379 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PTGDR2Q9Y5Y4 395 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KPTNQ9Y664 436 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 URGCP-MRPS24S4R325 110 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 UBN2Q6ZU65 1347 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PCDH11XQ9BZA7 1347 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PCDH11YQ9BZA8 1340 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CNTNAP2Q9UHC6 1331 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 LRPPRCP42704 1394 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 MAP3K5Q99683 1374 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PPIP5K1Q6PFW1 1433 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ADGRL3Q9HAR2 1447 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 A0A1W2PR48 441 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PRR23AA6NEV1 266 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NPIPB5A8MRT5 1133 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 HEPACAM2A8MVW5 462 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KCNU1A8MYU2 1149 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 USP17L23D6RBM5 183 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RNASEK-C17orf49H0YIS7 233 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 H3BN98 237 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SGK494L7N484 410 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 LEFTY2O00292 366 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PDXKO00764 312 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SDHDO14521 159 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 TRAFD1O14545 582 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 TRIM24O15164 1050 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CTIFO43310 598 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 EMC8O43402 210 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SNAI2O43623 268 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 TIMM8AO60220 97 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 SLC43A1O75387 559 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RSL1D1O76021 490 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 LYPLA2O95372 231 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SNAP29O95721 258 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CST4P01036 141 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CST1P01037 141 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 APOC1P02654 83 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CALB1P05937 261 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SERPINE2P07093 398 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PROS1P07225 676 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GP1BAP07359 652 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CHRNGP07510 517 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CD63P08962 238 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RNF224P0DH78 156 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SMIM10L1P0DMW3 83 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SPP1P10451 314 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 FCGR1AP12314 374 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NR2C1P13056 603 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GFAPP14136 432 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SLC2A4P14672 509 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 B4GALT1P15291 398 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CR2P20023 1033 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 DRD4P21917 467 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 HLA-DMAP28067 261 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CRABP1P29762 137 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PRDX2P32119 198 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 OTX1P32242 354 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 CDAP32320 146 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 UGT2B10P36537 528 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 IER3P46695 156 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NPBWR1P48145 328 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RFX5P48382 616 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 MRPL19P49406 292 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 RASSF2P50749 326 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CDK9P50750 372 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 ART1P52961 327 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 MAGOHP61326 146 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 ERVS71-1P61550 626 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SIRPAP78324 504 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PITPNAQ00169 270 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 MGAT3Q09327 533 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 FOXL1Q12952 345 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 EMC2Q15006 297 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RNPS1Q15287 305 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 TMED2Q15363 201 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 TAF13Q15543 124 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 TRIP10Q15642 601 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNHIT3Q15649 155 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 RBBP7Q16576 425 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms