RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 NUBPLQ8TB37 319 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 GAL3ST4Q96RP7 486 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 OR10A5Q9H207 317 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 WDR55Q9H6Y2 383 aaPredicted RBP14.37□□□□□ -0.11
CLN6-211ENST00000635754 SLAMF7Q9NQ25 335 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 ATP6V1HQ9UI12 483 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 MAPRE3Q9UPY8 281 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 YARS2Q9Y2Z4 477 aaKnown RBP14.37□□□□□ -0.11
CLN6-211ENST00000635754 USH1CQ9Y6N9 552 aa14.37□□□□□ -0.11
CLN6-211ENST00000635754 TMEM200CA6NKL6 621 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 DYNC1I1O14576 645 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 OR2J2O76002 312 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 SLITRK5O94991 958 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 CLPSP04118 112 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 TNFSF10P50591 281 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 SSR4P51571 173 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 DIO3P55073 304 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 MRPS35P82673 323 aaKnown RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 OC90Q02509 493 aaPredicted RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 MGAT2Q10469 447 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 TUBA3CQ13748 450 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 ZNF169Q14929 603 aaPredicted RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 ZNF385BQ569K4 471 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 ZNF628Q5EBL2 1059 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 COLEC12Q5KU26 742 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 TUBA3EQ6PEY2 450 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 TMEM156Q8N614 296 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 HORMAD2Q8N7B1 307 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 CTHRC1Q96CG8 243 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 ERP27Q96DN0 273 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 AMDHD1Q96NU7 426 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 PRPF18Q99633 342 aaKnown RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 LIN28AQ9H9Z2 209 aaKnown RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 ATAD3AQ9NVI7 634 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 BCAP29Q9UHQ4 241 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 CFL2Q9Y281 166 aa14.36□□□□□ -0.11
CLN6-211ENST00000635754 SMG1Q96Q15 3661 aaKnown RBP14.36□□□□□ -0.11
CLN6-211ENST00000635754 TRAV17A0A0B4J275 112 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 WWP2O00308 870 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 DIAPH2O60879 1101 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 BCAS2O75934 225 aaPredicted RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 PCSK2P16519 638 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 S1PR1P21453 382 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 CYB561P49447 251 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 CLDN8P56748 225 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 EXOSC7Q15024 291 aaKnown RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 EBPQ15125 230 aaKnown RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 PLEKHN1Q494U1 663 aaPredicted RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 SLC9B1Q4ZJI4 515 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 TRMT12Q53H54 448 aaKnown RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 HLA-DQA1Q5Y7H0 255 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 PRICKLE2Q7Z3G6 844 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 MAVSQ7Z434 540 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 SPATA19Q7Z5L4 167 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ZNF615Q8N8J6 731 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 OR7A2PQ8NGA2 310 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ZFP28Q8NHY6 868 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ASB15Q8WXK1 588 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 KAT2AQ92830 837 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ZBED6CLQ96FA7 236 aaPredicted RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 MAELQ96JY0 434 aaKnown RBP14.35□□□□□ -0.11
CLN6-211ENST00000635754 WWTR1Q9GZV5 400 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 GLIPR2Q9H4G4 154 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ANKRD10Q9NXR5 420 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 LUZP4Q9P127 313 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 LRFN1Q9P244 771 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
CLN6-211ENST00000635754 C2orf92A0A1B0GVN3 265 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 ZNF195O14628 629 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 SUV39H1O43463 412 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 SORBS2O94875 1100 aaKnown RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 TGDSO95455 350 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 CBX7O95931 251 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 TRHRP34981 398 aaPredicted RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 CD96P40200 585 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 ST13P50502 369 aaKnown RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 HLCSP50747 726 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 C21orf58P58505 322 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 HSPB3Q12988 150 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 OR1C1Q15619 314 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 MPEG1Q2M385 716 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 CPTPQ5TA50 214 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 C16orf47Q6ZP98 133 aaPredicted RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 RIMKLAQ8IXN7 391 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 KRTCAP2Q8N6L1 136 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 OR52R1Q8NGF1 315 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 C16orf52Q8NHV5 167 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 SLC22A8Q8TCC7 542 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 ACTRT2Q8TDY3 377 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 CIDECQ96AQ7 238 aaPredicted RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 SIGLEC12Q96PQ1 595 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 DPY30Q9C005 99 aa14.34□□□□□ -0.11
CLN6-211ENST00000635754 ACSS1Q9NUB1 689 aaPredicted RBP14.34□□□□□ -0.11
CLN6-211ENST00000635754 A0A087WV62 115 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms