RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ATP6V0BQ99437 205 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 HNRNPABQ99729 332 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 GABRG3Q99928 467 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 P2RY13Q9BPV8 354 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ACBD6Q9BR61 282 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ACAT2Q9BWD1 397 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 CACNG6Q9BXT2 260 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 C6orf106Q9H6K1 298 aaPredicted RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 Q9H8V8 135 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 FKRPQ9H9S5 495 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PARVGQ9HBI0 331 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM9BQ9NQ34 198 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 GKN1Q9NS71 199 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 IARS2Q9NSE4 1012 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 OCIAD1Q9NX40 245 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 SLCO1C1Q9NYB5 712 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 IL37Q9NZH6 218 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 TXNDC16Q9P2K2 825 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 KLK13Q9UKR3 277 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 KCNS2Q9ULS6 477 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 PCDHGA1Q9Y5H4 931 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ANKRD17O75179 2603 aaKnown RBP2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 NUMA1Q14980 2115 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 ABCA12Q86UK0 2595 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 MYLKQ15746 1914 aa2.27□□□□□ -2.05
SMARCB1-208ENST00000634926 KNL1Q8NG31 2342 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MYO9AB2RTY4 2548 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SPTAN1Q13813 2472 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TRAV19A0A0A6YYK7 116 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 IGHV1OR15-9A0A0B4J2B8 117 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A0G2JPF8 293 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PRB8 838 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF840PA6NDX5 716 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 KPNA7A9QM74 516 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 HNRNPCL3B7ZW38 293 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SGK1O00141 431 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GAPDHSO14556 408 aaPredicted RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CYB561D2O14569 222 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PGRMC2O15173 223 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 FLRT2O43155 660 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CAVIN2O95810 425 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GSRP00390 522 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SERPINF2P08697 491 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF883P0CG24 379 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 HNRNPCL4P0DMR1 293 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CCDC192P0DO97 292 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 FCGR1AP12314 374 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 IRF2P14316 349 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 DAOP14920 347 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CKMT2P17540 419 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 LBPP18428 481 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GABRG2P18507 467 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CBLP22681 906 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 WARSP23381 471 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CD27P26842 260 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PSMB4P28070 264 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 LONP1P36776 959 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ACOT2P49753 483 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CLK1P49759 484 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PGFP49763 221 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ARPP19P56211 112 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MTCP1P56278 107 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GSDMDP57764 484 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SEC61A1P61619 476 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 RPS18P62269 152 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 IRX4P78413 519 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CX3CL1P78423 397 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ARF5P84085 180 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ILF2Q12905 390 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 NPRL3Q12980 569 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MFAP5Q13361 173 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TRIM29Q14134 588 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 LASP1Q14847 261 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC39A14Q15043 492 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 RPS6KA1Q15418 735 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CTU2Q2VPK5 515 aaKnown RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF718Q3SXZ3 478 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 UGT3A2Q3SY77 523 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ELFN2Q5R3F8 820 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SDHAF4Q5VUM1 108 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CYB5D1Q6P9G0 228 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PAQR9Q6ZVX9 377 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 KCTD9Q7L273 389 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 GPBP1Q86WP2 473 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SFR1Q86XK3 245 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 C12orf56Q8IXR9 622 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 NDUFAF2Q8N183 169 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CRYBG2Q8N1P7 616 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 ALLCQ8N6M5 410 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 DEFB124Q8NES8 71 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TSTD1Q8NFU3 115 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 OR5B17Q8NGF7 314 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 PSMA8Q8TAA3 256 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 TMED6Q8WW62 240 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 IRGQQ8WZA9 623 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 BCL2L2Q92843 193 aaPredicted RBP2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 CD101Q93033 1021 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 WBP2Q969T9 261 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 MYLPFQ96A32 169 aa2.26□□□□□ -2.05
SMARCB1-208ENST00000634926 SGF29Q96ES7 293 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms