RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UQCRC2P22695 453 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PDX1P52945 283 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 KCNAB2Q13303 367 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SLC14A1Q13336 389 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 AMIGO2Q86SJ2 522 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 OR4N4Q8N0Y3 316 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CDRT4Q8N9R6 151 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PIK3C3Q8NEB9 887 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 BAHD1Q8TBE0 780 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 GPBAR1Q8TDU6 330 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 NEK7Q8TDX7 302 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PYDC1Q8WXC3 89 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CLDN23Q96B33 292 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 TRAPPC9Q96Q05 1148 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 MYCBPQ99417 103 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 OR52A5Q9H2C5 316 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SACM1LQ9NTJ5 587 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SCOCQ9UIL1 159 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 TDRD15B5MCY1 1934 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 NPPBP16860 134 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PMS2P3Q13401 168 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ISXQ2M1V0 245 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF585AQ6P3V2 769 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 OR2AJ1Q8NGZ0 328 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 MIPOL1Q8TD10 442 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 RBP7Q96R05 134 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 APOL4Q9BPW4 351 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PITHD1Q9GZP4 211 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 POMT2Q9UKY4 750 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 LIPT1Q9Y234 373 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 BTBD3Q9Y2F9 522 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 DNAJC15Q9Y5T4 150 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 DOCK6Q96HP0 2047 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 DIDO1Q9BTC0 2240 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 IGHV5-51A0A0C4DH38 117 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 DDAH2O95865 285 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SERPINA1P01009 418 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CYP4B1P13584 511 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ADSLP30566 484 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 UBE2NP61088 152 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CHRNEQ04844 493 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 RIN1Q13671 783 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 EXT1Q16394 746 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SNAPC1Q16533 368 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CARD17Q5XLA6 110 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SLC22A10Q63ZE4 541 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF683Q8IZ20 524 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CLECL1Q8IZS7 167 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PDPRQ8NCN5 879 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 WDR77Q9BQA1 342 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 HHATLQ9HCP6 504 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 TBC1D23Q9NUY8 699 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 LRFN1Q9P244 771 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 MED31Q9Y3C7 131 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CACNA1CQ13936 2221 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CXorf51AA0A1B0GTR3 108 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 EME2A4GXA9 379 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SEMA3DO95025 777 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 GADD45GO95257 159 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 CD160O95971 181 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 FABP3P05413 133 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 HNRNPH1P31943 449 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 IL11RAQ14626 422 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF630Q2M218 657 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PDCD4Q53EL6 469 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 REEP3Q6NUK4 255 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 SLCO4C1Q6ZQN7 724 aa8.57□□□□□ -1.04
HDAC9-229ENST00000622668 ST13P4Q8IZP2 240 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PDLIM5Q96HC4 596 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 WBP11Q9Y2W2 641 aaKnown RBP8.57□□□□□ -1.04
HDAC9-229ENST00000622668 PI4KAP42356 2102 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 ABCA4P78363 2273 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 POLEQ07864 2286 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 TP73O15350 636 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 RNF13O43567 381 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 MAN1A2O60476 641 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 PEX11BO96011 259 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 ADORA3P0DMS8 318 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 CPMP14384 443 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 FOLR1P15328 257 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 UCNP55089 124 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 RPS18P62269 152 aaKnown RBP8.56□□□□□ -1.04
HDAC9-229ENST00000622668 SIRPAP78324 504 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 TMEM201Q5SNT2 666 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 OR4D9Q8NGE8 314 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 AGAP11Q8TF27 550 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 SENP5Q96HI0 755 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-229ENST00000622668 HIST1H2AAQ96QV6 131 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 ATOH8Q96SQ7 321 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 OSBPL10Q9BXB5 764 aa8.56□□□□□ -1.04
HDAC9-229ENST00000622668 TEX10Q9NXF1 929 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-229ENST00000622668 P4HTMQ9NXG6 502 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms