RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NIPAL4Q0D2K0 466 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 GAS6Q14393 721 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 NFATC4Q14934 902 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ABRAXAS2Q15018 415 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC25A25Q6KCM7 469 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MSANTD1Q6ZTZ1 278 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PLCZ1Q86YW0 608 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MCATQ8IVS2 390 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 OR51A7Q8NH64 312 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 HUS1BQ8NHY5 278 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 RHEBL1Q8TAI7 183 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 NEDD4LQ96PU5 975 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 UHRF1Q96T88 793 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 METTL8Q9H825 291 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 KCNS2Q9ULS6 477 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CARD8Q9Y2G2 431 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 A0A0A6YYC8 382 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 I3L1I5 382 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CLPXO76031 633 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 S100A9P06702 114 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 C8BP07358 591 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF806P0C7X5 589 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CD1DP15813 335 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 POU3F2P20265 443 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SFTPDP35247 375 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 EFR3AQ14156 821 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 EXOC3L2Q2M3D2 409 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 TRAPPC6BQ86SZ2 158 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CARM1Q86X55 608 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 LAS2Q8IYD9 372 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 OR5AR1Q8NGP9 310 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SIGLEC10Q96LC7 697 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 OR10A4Q9H209 315 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 RHCGQ9UBD6 479 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CDC14CA4D256 554 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 FABP12A6NFH5 140 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SHISA7A6NL88 538 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 EIF3FO00303 357 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ENTPD6O75354 484 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PRKCAP17252 672 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 AK4P27144 223 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 XCR1P46094 333 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 GSK3BP49841 420 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 RORCP51449 518 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CLCN2P51788 898 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 TAS2R38P59533 333 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CRYZQ08257 329 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SEC23BQ15437 767 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 C4orf46Q504U0 113 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PNCKQ6P2M8 343 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PARS2Q7L3T8 475 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SSX6Q7RTT6 188 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 DENND6BQ8NEG7 585 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MDGA1Q8NFP4 955 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CREB3L4Q8TEY5 395 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 DDX1Q92499 740 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 KCND3Q9UK17 655 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 TRIM64BA6NI03 449 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 NPPAP01160 153 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PROZP22891 400 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 CFL1P23528 166 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 DNAJB13P59910 316 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 YPEL5P62699 121 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 E2F1Q01094 437 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 CTBSQ01459 385 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TUBA3CQ13748 450 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PCLAFQ15004 111 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PRAMEF17Q5VTA0 474 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 GLT8D1Q68CQ7 371 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PM20D1Q6GTS8 502 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PGM2L1Q6PCE3 622 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 RPS27LQ71UM5 84 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ZFAND4Q86XD8 727 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TCEAL3Q969E4 200 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 FER1L6-AS2Q96M78 137 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 BOKQ9UMX3 212 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 A0A1W2PPW3 197 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 H3BML4 177 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 HLA-DPB1P04440 258 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PEPDP12955 493 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 APLNRP35414 380 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 EIF5AP63241 154 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 CBLBQ13191 982 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ALG10BQ5I7T1 473 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 NCCRP1Q6ZVX7 275 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 TWSG1Q9GZX9 223 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PARPBPQ9NWS1 579 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 MALT1Q9UDY8 824 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 GJD2Q9UKL4 321 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 ISPDA4D126 451 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 NPIPB15A6NHN6 443 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 UNC119BA6NIH7 251 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 GFRA2O00451 464 aa9.32□□□□□ -0.92
CLTCL1-211ENST00000621271 RDH16O75452 317 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms