RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PORP16435 677 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 RAB14P61106 215 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PHC1P78364 1004 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 SHC2P98077 582 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 KIAA0040Q15053 153 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 DPY19L1Q2PZI1 675 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CATSPEREQ5SY80 951 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 NOXRED1Q6NXP6 359 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GPR149Q86SP6 731 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 LGI4Q8N135 537 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM160A2Q8N612 972 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CSNK1A1LQ8N752 337 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 DTX3Q8N9I9 347 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 THEM6Q8WUY1 208 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PDLIM5Q96HC4 596 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TOX2Q96NM4 488 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 AP3M1Q9Y2T2 418 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ANKRD36A6QL64 1941 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CACNA1DQ01668 2161 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 HAT1O14929 419 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TLX3O43711 291 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 SSNA1O43805 119 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 OR12D1P0DN82 309 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ACRV1P26436 265 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CD97P48960 835 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PNLIPRP1P54315 467 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GP2P55259 537 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 NCS1P62166 190 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 FXNQ16595 210 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF691Q5VV52 312 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GTF2IRD2BQ6EKJ0 949 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM225Q6GV28 225 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ARL9Q6T311 187 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GAREM2Q75VX8 874 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GTF2IRD2Q86UP8 949 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 P2RY8Q86VZ1 359 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF676Q8N7Q3 588 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZFP90Q8TF47 636 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 APIPQ96GX9 242 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZSWIM3Q96MP5 696 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF641Q96N77 438 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 RETREG1Q9H6L5 497 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PRTFDC1Q9NRG1 225 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 VNN3Q9NY84 501 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ENPP5Q9UJA9 477 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CCL27Q9Y4X3 112 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PATJQ8NI35 1801 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 NINQ8N4C6 2090 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 INHBBP09529 407 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 PRKAR1AP10644 381 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 HNMTP50135 292 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TSPAN5P62079 268 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CRTC2Q53ET0 693 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ATG9BQ674R7 924 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 OR2T5Q6IEZ7 315 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MEX3DQ86XN8 651 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 GPR26Q8NDV2 337 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 PROKR2Q8NFJ6 384 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 OR2T29Q8NH02 315 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MCFD2Q8NI22 146 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 FAR1Q8WVX9 515 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MUL1Q969V5 352 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ARRDC3Q96B67 414 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CNDP2Q96KP4 475 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SAMD11Q96NU1 681 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 GFM1Q96RP9 751 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF347Q96SE7 839 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SORBS1Q9BX66 1292 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 RAB11FIP5Q9BXF6 653 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 B3GNT4Q9C0J1 378 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 POLE4Q9NR33 117 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM45AQ9NWC5 275 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 POU2F3Q9UKI9 436 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 AREL1O15033 823 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 C1QCP02747 245 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 IFNA6P05013 189 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 RETP07949 1114 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TNFRSF1BP20333 461 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 GJA4P35212 333 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 P2RY2P41231 377 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 CTSCP53634 463 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SCN1BQ07699 218 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 HSD11B1LQ7Z5J1 315 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 OR51L1Q8NGJ5 315 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 UBE2FQ969M7 185 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 RADILQ96JH8 1075 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TRIM39Q9HCM9 518 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MKKSQ9NPJ1 570 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 SPATA7Q9P0W8 599 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 COMMD3Q9UBI1 195 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 NEUROG3Q9Y4Z2 214 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 LINC01553A4QN01 128 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 TLX2O43763 284 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 UGT2B11O75310 529 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MT-ND2P03891 347 aa7.87□□□□□ -1.15
PTPDC1-204ENST00000620992 MRPL3P09001 348 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms