RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CMAHPQ9Y471 501 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 SLC30A4O14863 429 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 GPR37L1O60883 481 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 INMTO95050 263 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 RCBTB2O95199 551 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 BCHEP06276 602 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 IL3P08700 152 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 AGXTP21549 392 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 CD6P30203 668 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 IGFALSP35858 605 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 RAB4BP61018 213 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 NDUFAF6Q330K2 333 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 TNFAIP8L2Q6P589 184 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-204ENST00000613228 RSPO2Q6UXX9 243 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-204ENST00000613228 CFAP77Q6ZQR2 320 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 ZSWIM9Q86XI8 627 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 SLC34A3Q8N130 599 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 Q8N9G6 341 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-204ENST00000613228 GPR151Q8TDV0 419 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 LMX1AQ8TE12 382 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 BCL7CQ8WUZ0 217 aaPredicted RBP8.31□□□□□ -1.08
PDE6A-204ENST00000613228 SORCS1Q8WY21 1168 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 SGTBQ96EQ0 304 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 NDC1Q9BTX1 674 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 MCOLN1Q9GZU1 580 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 CLMPQ9H6B4 373 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 RC3H2Q9HBD1 1191 aaKnown RBP8.31□□□□□ -1.08
PDE6A-204ENST00000613228 HCN3Q9P1Z3 774 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 PLAGL1Q9UM63 463 aa8.31□□□□□ -1.08
PDE6A-204ENST00000613228 CHURC1-FNTBB4DL54 471 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 CLEC3AO75596 197 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 C1orf105O95561 183 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SMIM18P0DKX4 95 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 DDOSTP39656 456 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 XKP51811 444 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SMSP52788 366 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ATP12AP54707 1039 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 CSTF1Q05048 431 aaKnown RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SIM2Q14190 667 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 FAM214AQ32MH5 1076 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF648Q5T619 568 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 KIAA1614Q5VZ46 1190 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 C3orf33Q6P1S2 294 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 AHSA2Q719I0 299 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TMEM173Q86WV6 379 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 RNF130Q86XS8 419 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF440Q8IYI8 595 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 FBXO15Q8NCQ5 510 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 NT5DC2Q9H857 520 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 LIN7BQ9HAP6 207 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 UGT2A1Q9Y4X1 527 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 U3KQV3 271 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 A0A0G2JMZ2 1700 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TRBV23OR9-2A0A075B6M9 112 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TSTD3H0UI37 97 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TLR4O00206 839 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 KLK8O60259 260 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PRAMEF12O95522 483 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PRSS56P0CW18 603 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 RAB3BP20337 219 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 CCR7P32248 378 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PCGF2P35227 344 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 RPS5P46782 204 aaKnown RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PAMR1Q6UXH9 720 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 OR7G3Q8NG95 312 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 EPYCQ99645 322 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 FUNDC2Q9BWH2 189 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SDHAF3Q9NRP4 125 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 NLGN3Q9NZ94 848 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ABI3Q9P2A4 366 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 H0YIV9 168 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SERPINA3P01011 423 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 GNAO1P09471 354 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 APOFQ13790 326 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TCTE1Q5JU00 501 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 FAM182AQ5T1J6 154 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 CCDC71Q8IV32 467 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 LRRC25Q8N386 305 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 FBXL20Q96IG2 436 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TMEM74Q96NL1 305 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 NEURL2Q9BR09 285 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 POLR2J3Q9H1A7 115 aaKnown RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 CMTM6Q9NX76 183 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 PTGFRNQ9P2B2 879 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ENPP5Q9UJA9 477 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 SERTAD3Q9UJW9 196 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TRAPPC2P0DI81 140 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TRAPPC2BP0DI82 140 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF8P17098 575 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 RHCEP18577 417 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 GJA4P35212 333 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 ALDH3B2P48448 385 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 VASPP50552 380 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-204ENST00000613228 DPTQ07507 201 aa8.3□□□□□ -1.08
PDE6A-204ENST00000613228 TRAM2Q15035 370 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms