RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MMP20O60882 483 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 PTAFRP25105 342 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 RSU1Q15404 277 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SPIN3Q5JUX0 258 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 FKBP1CQ5VVH2 108 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 STEAP3Q658P3 488 aa8.41□□□□□ -1.06
TTC28-208ENST00000612946 SDR39U1Q9NRG7 319 aaPredicted RBP8.41□□□□□ -1.06
TTC28-208ENST00000612946 TP53BP1Q12888 1972 aaPredicted RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 MC3RP41968 323 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 MAP4K2Q12851 820 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 SYT6Q5T7P8 510 aaPredicted RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 TRMT10BQ6PF06 316 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 KIAA1324Q6UXG2 1013 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 MITD1Q8WV92 249 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 TMEM106CQ9BVX2 250 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 TMEM200CA6NKL6 621 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 KIAA0355O15063 1070 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 FADS1O60427 444 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CD48P09326 243 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 GAAP10253 952 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CETPP11597 493 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CSNK2A2P19784 350 aaPredicted RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 IL1R2P27930 398 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 SSBP1Q04837 148 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 PUM1Q14671 1186 aaKnown RBP eCLIP8.4□□□□□ -1.06
TTC28-208ENST00000612946 TSSK4Q6SA08 328 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CEACAM20Q6UY09 585 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 OTOP3Q7RTS5 596 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ZNF619Q8N2I2 560 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 GPR26Q8NDV2 337 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ZNF417Q8TAU3 575 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ADAD1Q96M93 576 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 TDRD3Q9H7E2 651 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 CD3GP09693 182 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 BMP4P12644 408 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 NCBP2P52298 156 aaKnown RBP eCLIP8.4□□□□□ -1.06
TTC28-208ENST00000612946 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CILP2Q8IUL8 1156 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 PKP4Q99569 1192 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ARHGAP39Q9C0H5 1083 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 PCED1AQ9H1Q7 454 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ZDHHC4Q9NPG8 344 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 DDX4Q9NQI0 724 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 OR2S2Q9NQN1 319 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 DKKL1Q9UK85 242 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 D6RAR5 112 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 SLC16A5O15375 505 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 GOT2P00505 430 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 HOXD13P35453 343 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CLEC12AQ5QGZ9 265 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CES5AQ6NT32 575 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CXorf40AQ8TE69 158 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 SLC25A21Q9BQT8 299 aaPredicted RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 GNG13Q9P2W3 67 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 EXO1Q9UQ84 846 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 FMO6PO60774 539 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 PIAS1O75925 651 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 MT-ND4LP03901 98 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 IRF9Q00978 393 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CRTC1Q6UUV9 634 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 DPY19L4Q7Z388 723 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 TRMT10AQ8TBZ6 339 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 SLC6A7Q99884 636 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 TMPRSS11EQ9UL52 423 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 PCDHB14Q9Y5E9 798 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 AMY2AP04746 511 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 FAM163BP0C2L3 166 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 SLAMF1Q13291 335 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 C1QTNF12Q5T7M4 302 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ADIPOR2Q86V24 386 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 ZC3H3Q8IXZ2 948 aaKnown RBP8.4□□□□□ -1.06
TTC28-208ENST00000612946 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 CHRDQ9H2X0 955 aa8.4□□□□□ -1.06
TTC28-208ENST00000612946 IFNGR1P15260 489 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 FXYD6P3P58550 94 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 GINS1Q14691 196 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 PROKR1Q8TCW9 393 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 OR51I1Q9H343 314 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 FZD10Q9ULW2 581 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 C4AP0C0L4 1744 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 EIF3FO00303 357 aaPredicted RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 ELFN1P0C7U0 828 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 PCGF2P35227 344 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 P2RX3P56373 397 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 SLC17A1Q14916 467 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 FAM117BQ6P1L5 589 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 ZDHHC14Q8IZN3 488 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 L3HYPDHQ96EM0 354 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 WRAP53Q9BUR4 548 aaKnown RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 IL17RBQ9NRM6 502 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 MED17Q9NVC6 651 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 IL37Q9NZH6 218 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms