RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SLC35E2P0CK97 266 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CCDC166P0CW27 439 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 TMIGD3P0DMS9 266 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 MTHFD2P13995 350 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 COX7A2P14406 83 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PIK3CBP42338 1070 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 SSR2P43308 183 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ARFIP1P53367 373 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PLIN5Q00G26 463 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 POU4F1Q01851 419 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 TNFRSF17Q02223 184 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 FAM27E3Q08E93 113 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 MGAT2Q10469 447 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CAPRIN1Q14444 709 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 MORF4L2Q15014 288 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 RPS6KA2Q15349 733 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PCBP2Q15366 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
VRK3-220ENST00000600259 SF3B4Q15427 424 aaKnown RBP eCLIP5.56□□□□□ -1.52
VRK3-220ENST00000600259 PPP1R7Q15435 360 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ZKSCAN8Q15776 578 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 PDK4Q16654 411 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 HIST2H2ACQ16777 129 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 PAGE2BQ5JRK9 111 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 HIST2H2AA3Q6FI13 130 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 MED27Q6P2C8 311 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 RNF111Q6ZNA4 994 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CAPN12Q6ZSI9 719 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 SLC29A4Q7RTT9 530 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ISCA2Q86U28 154 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 YRDCQ86U90 279 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 LRRC8AQ8IWT6 810 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PDIK1LQ8N165 341 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 VWA5B2Q8N398 1253 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 SNX31Q8N9S9 440 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 WDSUB1Q8N9V3 476 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 FAM83FQ8NEG4 500 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 HUS1BQ8NHY5 278 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ZNF592Q92610 1267 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 RIT1Q92963 219 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 HGDQ93099 445 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 RGMAQ96B86 450 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 TMEM41AQ96HV5 264 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 WFIKKN1Q96NZ8 548 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 GAL3ST4Q96RP7 486 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 NODALQ96S42 347 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ATOH8Q96SQ7 321 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 OSBPL9Q96SU4 736 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 NAP1L3Q99457 506 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 GPR22Q99680 433 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 YIPF4Q9BSR8 244 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ZNF395Q9H8N7 513 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 CNOT10Q9H9A5 744 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 SNX15Q9NRS6 342 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.56□□□□□ -1.52
VRK3-220ENST00000600259 TEX10Q9NXF1 929 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 MS4A12Q9NXJ0 267 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PSD3Q9NYI0 1048 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CLCF1Q9UBD9 225 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ASIC3Q9UHC3 531 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ZNF639Q9UID6 485 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PPP2R2CQ9Y2T4 447 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 TESMINQ9Y4I5 508 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 WIF1Q9Y5W5 379 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 SPACA6W5XKT8 324 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 DOCK7Q96N67 2140 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 TRIM64A6NGJ6 449 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 TRIM64BA6NI03 449 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 CAPN14A8MX76 684 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 INAFM1C9JVW0 142 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 K7EPI3 171 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 CES2O00748 559 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 TP53I11O14683 189 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 GNB5O14775 395 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 MSTNO14793 375 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 HCRTR2O43614 444 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 DYRK3O43781 588 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 CCNT2O60583 730 aaKnown RBP5.55□□□□□ -1.52
VRK3-220ENST00000600259 ICOSLGO75144 302 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 TGM6O95932 706 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 FAM58BPP0C7Q3 252 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 NAGAP17050 411 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 PTX3P26022 381 aaPredicted RBP5.55□□□□□ -1.52
VRK3-220ENST00000600259 ABCD3P28288 659 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 PCSK6P29122 969 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 SERPINB1P30740 379 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 TLX1P31314 330 aaPredicted RBP5.55□□□□□ -1.52
VRK3-220ENST00000600259 MC3RP41968 323 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 STARP49675 285 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 LHX2P50458 406 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 GFRA1P56159 465 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 CLDN15P56746 228 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 ATP6V0D1P61421 351 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 RPS13P62277 151 aaKnown RBP5.55□□□□□ -1.52
VRK3-220ENST00000600259 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 ACKR1Q16570 336 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 Q5PR19 223 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 FBXW10Q5XX13 1052 aa5.55□□□□□ -1.52
VRK3-220ENST00000600259 GRHL2Q6ISB3 625 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms