RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	FAM71E1	Q6IPT2	247 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ANKRD26P1	Q6NSI1	321 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	DGAT2L6	Q6ZPD8	337 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	LRRC25	Q8N386	305 aa	Predicted RBP	18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC5A8	Q8N695	610 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	WBP1	Q96G27	269 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ART5	Q96L15	291 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC25A18	Q9H1K4	315 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	EPS8L2	Q9H6S3	715 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF552	Q9H707	407 aa	Predicted RBP	18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	TEKT2	Q9UIF3	430 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	CES1P1	Q9UKY3	287 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ERVK-19	Q9WJR5	959 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	TNRC6A	Q8NDV7	1962 aa	Known RBP	18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	BSN	Q9UPA5	3926 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808		K7EM74	188 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	PDGFA	P04085	211 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	NTS	P30990	170 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	PGM1	P36871	562 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	STX5	Q13190	355 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	CRB2	Q5IJ48	1285 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	ABHD17B	Q5VST6	288 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	TCTN3	Q6NUS6	607 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	ISLR2	Q6UXK2	745 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	GALNT12	Q8IXK2	581 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	MORN4	Q8NDC4	146 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	NFAM1	Q8NET5	270 aa	Predicted RBP	18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	TM9SF4	Q92544	642 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	PPCDC	Q96CD2	204 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	FCRL1	Q96LA6	429 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	SEMA4C	Q9C0C4	833 aa		18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	NOP53	Q9NZM5	478 aa	Known RBP	18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	WBP11	Q9Y2W2	641 aa	Known RBP	18.73	■□□□□ 0.59
IRF3-221	ENST00000598808	F10	P00742	488 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	PRPS2	P11908	318 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	IDO1	P14902	403 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	CPOX	P36551	454 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	SOX8	P57073	446 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	NFATC3	Q12968	1075 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	PTGR1	Q14914	329 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	C16orf89	Q6UX73	402 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	PTRH1	Q86Y79	214 aa	Known RBP	18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF321P	Q8N8H1	164 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	CNRIP1	Q96F85	164 aa	Predicted RBP	18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	MFRP	Q9BY79	579 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC35C2	Q9NQQ7	365 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	EHD3	Q9NZN3	535 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	SH3BP4	Q9P0V3	963 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	ABI3	Q9P2A4	366 aa		18.72	■□□□□ 0.59
IRF3-221	ENST00000598808	ST13	P50502	369 aa	Known RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	EMX2	Q04743	252 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	LTB4R	Q15722	352 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	FBXW10	Q5XX13	1052 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	TMEM198	Q66K66	360 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	HSDL2	Q6YN16	418 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	CCDC116	Q8IYX3	515 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	SAMD14	Q8IZD0	417 aa	Predicted RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	FAM13C	Q8NE31	585 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	ADCY4	Q8NFM4	1077 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	OR1N1	Q8NGS0	311 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	ELP5	Q8TE02	316 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	TSPEAR	Q8WU66	669 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	SENP5	Q96HI0	755 aa	Predicted RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	SMAD5	Q99717	465 aa	Known RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	REEP4	Q9H6H4	257 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	EFCAB1	Q9HAE3	211 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	DOCK10	Q96BY6	2186 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	BOD1L1	Q8NFC6	3051 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	HRK	O00198	91 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	DDAH2	O95865	285 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	G6PD	P11413	515 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	CPA2	P48052	419 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	NCBP2	P52298	156 aa	Known RBP eCLIP	18.71	■□□□□ 0.59	2e-7	■■■■■ 41.8
IRF3-221	ENST00000598808	ARG2	P78540	354 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	SNCB	Q16143	134 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	COLEC12	Q5KU26	742 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	RNF111	Q6ZNA4	994 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	SNX32	Q86XE0	403 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	ZADH2	Q8N4Q0	377 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	APCDD1L	Q8NCL9	501 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	OR9A2	Q8NGT5	310 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF354B	Q96LW1	612 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	GAL3ST4	Q96RP7	486 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	CDCP1	Q9H5V8	836 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	ZBTB20	Q9HC78	741 aa	Predicted RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	PLA2G3	Q9NZ20	509 aa		18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	PRPF19	Q9UMS4	504 aa	Known RBP	18.71	■□□□□ 0.59
IRF3-221	ENST00000598808	CROCC	Q5TZA2	2017 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	BBIP1	A8MTZ0	92 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	PDPK1	O15530	556 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	DPM1	O60762	260 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	CIB2	O75838	187 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	ZFAND5	O76080	213 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	PRB1	P04280	392 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	DDX5	P17844	614 aa	Known RBP	18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	NME5	P56597	212 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	DUSP2	Q05923	314 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	MFAP5	Q13361	173 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	MEP1A	Q16819	746 aa		18.7	■□□□□ 0.58
IRF3-221	ENST00000598808	ACER2	Q5QJU3	275 aa		18.7	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms