RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZG16O60844 167 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 ANXA4P09525 319 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 FBXO45P0C2W1 286 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 NR0B1P51843 470 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 FOXO1Q12778 655 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 DUSP8Q13202 625 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 C3AR1Q16581 482 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 VWA5B2Q8N398 1253 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 SIMC1Q8NDZ2 872 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 ADCY4Q8NFM4 1077 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 OR7G1Q8NGA0 311 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 OR52N2Q8NGI0 321 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 PAQR8Q8TEZ7 354 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 TP53INP1Q96A56 240 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 SPACA9Q96E40 222 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 TRMOQ9BU70 441 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 IQCGQ9H095 443 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 SACM1LQ9NTJ5 587 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 TINAGQ9UJW2 476 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF407Q9C0G0 2248 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 TYROBPO43914 113 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 CRCPO75575 148 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 GLSO94925 669 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 PER3P56645 1201 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 KIAA0040Q15053 153 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 LTB4RQ15722 352 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 TRMT12Q53H54 448 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC22A10Q63ZE4 541 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 TMEM64Q6YI46 380 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 SMC6Q96SB8 1091 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM173AQ9BQD7 235 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 BRINP2Q9C0B6 783 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 PROK2Q9HC23 129 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 PLSCR2Q9NRY7 297 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 RYDENQ9NUL5 291 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 DTX4Q9Y2E6 619 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 CHCHD2Q9Y6H1 151 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF780BQ9Y6R6 833 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
SHKBP1-202ENST00000593764 NPIPB8E9PQR5 432 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CCL21O00585 134 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 AZIN1O14977 448 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 RSL1D1O76021 490 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CBX7O95931 251 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CHRNGP07510 517 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 PIGAP37287 484 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 GSTM5P46439 218 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 DNASE1L1P49184 302 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 PPIAP62937 165 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 HEPACAMQ14CZ8 416 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 EXOSC7Q15024 291 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CEBPEQ15744 281 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 NTRK2Q16620 822 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 IMPG1Q17R60 797 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 PRSS53Q2L4Q9 553 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 Q6ZSR9 355 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 MAMDC2Q7Z304 686 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CCDC116Q8IYX3 515 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 DND1Q8IYX4 353 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 C17orf47Q8NEP4 570 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 OR10G3Q8NGC4 313 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM76AQ8TAV0 307 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 MAGED4Q96JG8 741 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 TTTY12Q9BZ98 90 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 TUBB1Q9H4B7 451 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 ZDHHC11Q9H8X9 412 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 RRAGDQ9NQL2 400 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 SH3BGRL2Q9UJC5 107 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 EXO1Q9UQ84 846 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 NINQ8N4C6 2090 aa17.03■□□□□ 0.32
SHKBP1-202ENST00000593764 CRYBG3Q68DQ2 2970 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 NPHS1O60500 1241 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 P04436 131 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 FGF4P08620 206 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 PCSK2P16519 638 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 GPX3P22352 226 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 PRPH2P23942 346 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ARRB2P32121 409 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ETV4P43268 484 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 MRPS35P82673 323 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF763Q0D2J5 394 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 HYAL4Q2M3T9 481 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 UGT3A2Q3SY77 523 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF628Q5EBL2 1059 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ARL13AQ5H913 290 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 C6orf163Q5TEZ5 329 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM71E1Q6IPT2 247 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 NOXRED1Q6NXP6 359 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 GK5Q6ZS86 529 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 RNF165Q6ZSG1 346 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM47EQ6ZV65 393 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 TAGAPQ8N103 731 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 OR2T11Q8NH01 316 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF675Q8TD23 568 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 EXOSC8Q96B26 276 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms