RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 TRMT12Q53H54 448 aaKnown RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 IRAK1BP1Q5VVH5 260 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 TSPEARQ8WU66 669 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 ELP4Q96EB1 424 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 ITCHQ96J02 903 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 MAGED4Q96JG8 741 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 SLC25A23Q9BV35 468 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 ING2Q9H160 280 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 MMP25Q9NPA2 562 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 TAS2R9Q9NYW1 312 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 BCAP29Q9UHQ4 241 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 PPIEQ9UNP9 301 aaKnown RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 SNX8Q9Y5X2 465 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CELSR3Q9NYQ7 3312 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 A0A087WV62 115 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 TRBV11-1A0A0K0K1C0 115 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 A0A1W2PP18 115 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 MASP2O00187 686 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 HRKO00198 91 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 RFXANKO14593 260 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ANGPT2O15123 496 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 PLOD3O60568 738 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 SCN2BO60939 215 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 COQ9O75208 318 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ANP32DO95626 131 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CAPN3P20807 821 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ITGA3P26006 1051 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 SSTR4P31391 388 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 MC3RP41968 323 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 HBA1P69905 142 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 PRR5P85299 388 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 MGAT2Q10469 447 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CHAF1BQ13112 559 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 SZRD1Q7Z422 152 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 OR7G2Q8NG99 324 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ELP5Q8TE02 316 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 APOBEC4Q8WW27 367 aaKnown RBP12.68□□□□□ -0.38
VMP1-210ENST00000589823 THOC3Q96J01 351 aaKnown RBP12.68□□□□□ -0.38
VMP1-210ENST00000589823 CCDC115Q96NT0 180 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CNTNAP3BQ96NU0 1288 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 PANX1Q96RD7 426 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 NUDT9Q9BW91 350 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 DEFB126Q9BYW3 111 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CNTNAP3Q9BZ76 1288 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 SEMA4CQ9C0C4 833 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 MYLK2Q9H1R3 596 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
VMP1-210ENST00000589823 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 CHD8Q9HCK8 2581 aa12.68□□□□□ -0.38
VMP1-210ENST00000589823 ZFHX4Q86UP3 3567 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 EMC8O43402 210 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 ZFAND5O76080 213 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 CBX7O95931 251 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 S1PR1P21453 382 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 TRPC1P48995 793 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 GPR143P51810 404 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 PRKAG1P54619 331 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 SLC37A1P57057 533 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 CBX1P83916 185 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 Q0VFX4 171 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 CYLC2Q14093 348 aaPredicted RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 MMEL1Q495T6 779 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 C6orf10Q5SRN2 563 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 JMJD6Q6NYC1 403 aaPredicted RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 SLC2A7Q6PXP3 512 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 TMEM64Q6YI46 380 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 SLC29A4Q7RTT9 530 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 NUP43Q8NFH3 380 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 OR5L2Q8NGL0 311 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 RP9Q8TA86 221 aaKnown RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 SNRNP27Q8WVK2 155 aaKnown RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 MOAP1Q96BY2 351 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 LHPPQ9H008 270 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
VMP1-210ENST00000589823 SIRT3Q9NTG7 399 aaPredicted RBP12.67□□□□□ -0.38
VMP1-210ENST00000589823 ZCCHC3Q9NUD5 404 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms