RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 LRIT2A6NDA9 550 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 J3KTA2 159 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 MAN2B1O00754 1011 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 AP3D1O14617 1153 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 MID1O15344 667 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 LGI1O95970 557 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PTHP01270 115 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 DNTTP04053 509 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 IFI6P09912 130 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 OR12D1P0DN82 309 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 NR2F6P10588 404 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ACP5P13686 325 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 HIST1H1TP22492 207 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TGM1P22735 817 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 C21orf33P30042 268 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TLX1P31314 330 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GJA4P35212 333 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 OPRD1P41143 372 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 BUD31P41223 144 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 STAT5AP42229 794 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PCYT1AP49585 367 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 RORCP51449 518 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 NUDT6P53370 316 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 CASP9P55211 416 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 KIAA1024LP59773 190 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 RPS3AP61247 264 aaKnown RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ERVK-21P61565 698 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ST3GAL3Q11203 375 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 MLLT11Q13015 90 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TARDBPQ13148 414 aaKnown RBP eCLIP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 CBX3Q13185 183 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SLAMF1Q13291 335 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ENPP2Q13822 863 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SHHQ15465 462 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SPHARQ15513 63 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TSTQ16762 297 aaKnown RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 DUSP7Q16829 419 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 UAP1L1Q3KQV9 507 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ITPRIPL2Q3MIP1 535 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GPAT3Q53EU6 434 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 C3orf38Q5JPI3 329 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ENTPD8Q5MY95 495 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 AGBL4Q5VU57 503 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TCTN3Q6NUS6 607 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PGBD2Q6P3X8 592 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 C19orf48Q6RUI8 117 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 VITQ6UXI7 678 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SLC36A4Q6YBV0 504 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GET4Q7L5D6 327 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 EGFL6Q8IUX8 553 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ANKRD53Q8N9V6 530 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TP53I13Q8NBR0 393 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PLA2G15Q8NCC3 412 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GPR32P1Q8NGA4 272 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 VANGL1Q8TAA9 524 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PIGXQ8TBF5 258 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 CREB3L4Q8TEY5 395 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 AP3S1Q92572 193 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 PMM1Q92871 262 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 OSTF1Q92882 214 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 FGF13Q92913 245 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ITFG2Q969R8 447 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GAL3ST3Q96A11 431 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TMCO6Q96DC7 493 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 RSPRY1Q96DX4 576 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 LRRC3BQ96PB8 259 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 INSM2Q96T92 566 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TREX2Q9BQ50 279 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 CHCHD6Q9BRQ6 235 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 TSSK6Q9BXA6 273 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 C1QTNF2Q9BXJ5 285 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 GLIPR2Q9H4G4 154 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ARMC7Q9H6L4 198 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 C11orf16Q9NQ32 467 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 IMP3Q9NV31 184 aaKnown RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 MED17Q9NVC6 651 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 RLIMQ9NVW2 624 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 CXXC1Q9P0U4 656 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 AASSQ9UDR5 926 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SLC23A2Q9UGH3 650 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 HCN2Q9UL51 889 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 STUB1Q9UNE7 303 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 DIMT1Q9UNQ2 313 aaKnown RBP6.77□□□□□ -1.33
SPIDR-228ENST00000588781 ZNF232Q9UNY5 417 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SLC17A4Q9Y2C5 497 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 SPACA6W5XKT8 324 aa6.77□□□□□ -1.33
SPIDR-228ENST00000588781 MUC6Q6W4X9 2439 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 TBC1D3KA0A087X1G2 549 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 TRBV4-1A0A0J9YWV2 114 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 FEZF1A0PJY2 475 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 TBC1D3FA6NER0 549 aaPredicted RBP6.76□□□□□ -1.33
SPIDR-228ENST00000588781 PRAMEF25A6NGN4 478 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 RTCAO00442 366 aaKnown RBP6.76□□□□□ -1.33
SPIDR-228ENST00000588781 HAT1O14929 419 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 AXIN1O15169 862 aa6.76□□□□□ -1.33
SPIDR-228ENST00000588781 ERI3O43414 337 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms