RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 RPS6KA2Q15349 733 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 NTRK2Q16620 822 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 TBCELQ5QJ74 424 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 GALNT18Q6P9A2 607 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 FRMD7Q6ZUT3 714 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 SAMD14Q8IZD0 417 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 RIBC1Q8N443 379 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 TMEM251Q8N6I4 163 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 KCNA7Q96RP8 456 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 DMRTA2Q96SC8 542 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 SHCBP1LQ9BZQ2 653 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 DEFB127Q9H1M4 99 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 CHST11Q9NPF2 352 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 SIRT5Q9NXA8 310 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 TIMM22Q9Y584 194 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.31□□□□□ -0.28
DDX39A-208ENST00000588692 ZNF407Q9C0G0 2248 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 ITPR2Q14571 2701 aa13.31□□□□□ -0.28
DDX39A-208ENST00000588692 GNG14A0A1W2PPG7 69 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 TP53I11O14683 189 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 ZNHIT1O43257 154 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 HNRNPRO43390 633 aaKnown RBP13.3□□□□□ -0.28
DDX39A-208ENST00000588692 CPA3P15088 417 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 CHN1P15882 459 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 TIA1P31483 386 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX39A-208ENST00000588692 ALDH9A1P49189 494 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 NR0B1P51843 470 aaKnown RBP13.3□□□□□ -0.28
DDX39A-208ENST00000588692 NAGLUP54802 743 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 KCNJ2P63252 427 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 SLC18A2Q05940 514 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 HEPACAMQ14CZ8 416 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 FAM219BQ5XKK7 198 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 CCDC63Q8NA47 563 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 OR10G3Q8NGC4 313 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 ADIPOR1Q96A54 375 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 C11orf24Q96F05 449 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-208ENST00000588692 SECISBP2Q96T21 854 aaKnown RBP13.3□□□□□ -0.28
DDX39A-208ENST00000588692 BRINP2Q9C0B6 783 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 OXSMQ9NWU1 459 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 MAT2BQ9NZL9 334 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 UTS2RQ9UKP6 389 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 NOTCH2Q04721 2471 aa13.3□□□□□ -0.28
DDX39A-208ENST00000588692 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 A0A1B0GVC2 190 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ADAM10O14672 748 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 BCKDKO14874 412 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 PDE9AO76083 593 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 IL3P08700 152 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 NUDT17P0C025 328 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 S1PR1P21453 382 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 GPX3P22352 226 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 PIGAP37287 484 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 FEN1P39748 380 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 MAGEA5P43359 124 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 RAE1P78406 368 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 HMGCS1Q01581 520 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 MGAT2Q10469 447 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ZNF630Q2M218 657 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 PRAMEF20Q5VT98 475 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 MMP21Q8N119 569 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 CTHRC1Q96CG8 243 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ERP27Q96DN0 273 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 APIPQ96GX9 242 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ZNF681Q96N22 645 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 RUBCNLQ9H714 662 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 MKS1Q9NXB0 559 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 QPCTLQ9NXS2 382 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 EHD3Q9NZN3 535 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 HEY2Q9UBP5 337 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 B4GALT7Q9UBV7 327 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 ZNF639Q9UID6 485 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 CNOT11Q9UKZ1 510 aaKnown RBP13.29□□□□□ -0.28
DDX39A-208ENST00000588692 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 SUSD5O60279 629 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 HCN1O60741 890 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 CRCPO75575 148 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 CLDN14O95500 239 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 NAGAP17050 411 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 HTR1EP28566 365 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 FOXA1P55317 472 aa13.29□□□□□ -0.28
DDX39A-208ENST00000588692 VSNL1P62760 191 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms