RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 NRG3P56975 720 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 DCAF7P61962 342 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 MGAT2Q10469 447 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 EBPQ15125 230 aaKnown RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 SMU1Q2TAY7 513 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 ZNF750Q32MQ0 723 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 ATP6AP1LQ52LC2 224 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 XKR7Q5GH72 579 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 AGBL2Q5U5Z8 902 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 IL20RBQ6UXL0 311 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 BNC2Q6ZN30 1099 aaPredicted RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 C16orf47Q6ZP98 133 aaPredicted RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 HDXQ7Z353 690 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 TICAM1Q8IUC6 712 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 SULF2Q8IWU5 870 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 TRIM42Q8IWZ5 723 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 PSD4Q8NDX1 1056 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 OR2T11Q8NH01 316 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 AGR3Q8TD06 166 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 EXOSC8Q96B26 276 aaKnown RBP9.35□□□□□ -0.91
TPM4-207ENST00000588032 TLCD1Q96CP7 247 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 MTERF3Q96E29 417 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 BBS4Q96RK4 519 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 GAL3ST4Q96RP7 486 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 MAT2BQ9NZL9 334 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 PRODH2Q9UF12 536 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 PTGDR2Q9Y5Y4 395 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 ZNF462Q96JM2 2506 aa9.35□□□□□ -0.91
TPM4-207ENST00000588032 CLEC18AA5D8T8 446 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 MYO1GB0I1T2 1018 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 TMEM233B4DJY2 109 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ITM2AO43736 263 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 PEX1O43933 1283 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 PLOD3O60568 738 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 P04436 131 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 IFI6P09912 130 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 PRPS2P11908 318 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 NAGAP17050 411 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 CNR1P21554 472 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 NTSP30990 170 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 RPL3P39023 403 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 TMED10P49755 219 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 ST13P50502 369 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 RPL38P63173 70 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 PSPHP78330 225 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 MAD2L1Q13257 205 aaPredicted RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.916e-7■■□□□ 14.3
TPM4-207ENST00000588032 ZNF791Q3KP31 576 aaPredicted RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 GALNTL6Q49A17 601 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ZNF628Q5EBL2 1059 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FHL5Q5TD97 284 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 SLC22A10Q63ZE4 541 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ATG16L1Q676U5 607 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FAM111BQ6SJ93 734 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 CLEC18BQ6UXF7 455 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 RGS9BPQ6ZS82 235 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 MDGA2Q7Z553 956 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 R3HCC1LQ7Z5L2 792 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FAM9CQ8IZT9 166 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ZNF441Q8N8Z8 693 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ANKRD42Q8N9B4 389 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 CLEC18CQ8NCF0 446 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 C16orf52Q8NHV5 167 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 CDC26Q8NHZ8 85 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 RAB3IL1Q8TBN0 382 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 DOK4Q8TEW6 326 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 ADIPOR1Q96A54 375 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 SPACA9Q96E40 222 aaPredicted RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 HSPBAP1Q96EW2 488 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 FRMD6Q96NE9 622 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
TPM4-207ENST00000588032 HES7Q9BYE0 225 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 REEP4Q9H6H4 257 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 VIPAS39Q9H9C1 493 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 SACM1LQ9NTJ5 587 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 CNIH4Q9P003 139 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 BCAP29Q9UHQ4 241 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 HAO1Q9UJM8 370 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 MAPRE3Q9UPY8 281 aa9.34□□□□□ -0.91
TPM4-207ENST00000588032 A0A087WV62 115 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 PLOD2O00469 737 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 TP53I11O14683 189 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 ACOX3O15254 700 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 PEX11AO75192 247 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 LYPLA1O75608 230 aaPredicted RBP9.33□□□□□ -0.92
TPM4-207ENST00000588032 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
TPM4-207ENST00000588032 BCKDHAP12694 445 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 H2AFXP16104 143 aaPredicted RBP9.33□□□□□ -0.92
TPM4-207ENST00000588032 PCSK2P16519 638 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 ZNF24P17028 368 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 SDC1P18827 310 aa9.33□□□□□ -0.92
TPM4-207ENST00000588032 BGNP21810 368 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms