RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SRRM5B3KS81 715 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 K7EQS6 105 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 SGK1O00141 431 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NDC80O14777 642 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZNF263O14978 683 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZBTB14O43829 449 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 GPC4O75487 556 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PSMD10O75832 226 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 STAM2O75886 525 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 SLC4A1P02730 911 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZFYP08048 801 aaPredicted RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 PCP11498 1178 aaKnown RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 TMEM11P17152 192 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 GAP43P17677 238 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ERCC2P18074 760 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NMT1P30419 496 aaKnown RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 HOXA9P31269 272 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PNLIPRP2P54317 469 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PAX9P55771 341 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ARPP19P56211 112 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 HSD17B7P56937 341 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 HERV-K104P61576 105 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TRA2BP62995 288 aaKnown RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 CX3CL1P78423 397 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 IL1RL1Q01638 556 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 FCHO2Q0JRZ9 810 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 CCDC173Q0VFZ6 552 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PLA2G7Q13093 441 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 SRSF6Q13247 344 aaKnown RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 NFE2L1Q14494 772 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PPA1Q15181 289 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 HYAL4Q2M3T9 481 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ASTE1Q2TB18 679 aaPredicted RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZSCAN23Q3MJ62 389 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ARMC4Q5T2S8 1044 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 LIN9Q5TKA1 542 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 JADE1Q6IE81 842 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 UNC5DQ6UXZ4 953 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 MSANTD1Q6ZTZ1 278 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TMEM150AQ86TG1 271 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PLA2G4DQ86XP0 818 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NAXDQ8IW45 347 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TUSC5Q8IXB3 177 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 KIRREL3Q8IZU9 778 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NIPA2Q8N8Q9 360 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ANKRD20A12PQ8NF67 263 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 URGCPQ8TCY9 931 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 MIPOL1Q8TD10 442 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 RNF128Q8TEB7 428 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ESR2Q92731 530 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 KRT35Q92764 455 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 SMARCD2Q92925 531 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TMCO6Q96DC7 493 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 AK8Q96MA6 479 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 RUNDC3BQ96NL0 473 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TSGA13Q96PP4 275 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NAA11Q9BSU3 229 aaPredicted RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 SLC25A23Q9BV35 468 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 CCDC106Q9BWC9 280 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 LRRC2Q9BYS8 371 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 RTN4RQ9BZR6 473 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 DCTPP1Q9H773 170 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 PSTPIP2Q9H939 334 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZFP14Q9HCL3 533 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 POLD4Q9HCU8 107 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 MID1IP1Q9NPA3 183 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 TRPV5Q9NQA5 729 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 XPNPEP1Q9NQW7 623 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 GKN1Q9NS71 199 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 ZNF701Q9NV72 531 aaPredicted RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 PSD3Q9NYI0 1048 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 WSB2Q9NYS7 404 aaPredicted RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 DNAJB9Q9UBS3 223 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 HOOK1Q9UJC3 728 aaKnown RBP2.26□□□□□ -2.05
VAPA-208ENST00000584796 PILRBQ9UKJ0 227 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 GRID1Q9ULK0 1009 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NENFQ9UMX5 172 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 NBEAL1Q6ZS30 2694 aa2.26□□□□□ -2.05
VAPA-208ENST00000584796 HCFC1P51610 2035 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 A4D1N5 150 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 GAPDHSO14556 408 aaPredicted RBP2.25□□□□□ -2.05
VAPA-208ENST00000584796 PGRMC2O15173 223 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 TO15178 435 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 CHADO15335 359 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 MSH4O15457 936 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 HS6ST1O60243 411 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 MITFO75030 526 aaPredicted RBP2.25□□□□□ -2.05
VAPA-208ENST00000584796 AVILO75366 819 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 SEC22BO75396 215 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 TADA2AO75478 443 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 AKAP3O75969 853 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 SIX3O95343 332 aaPredicted RBP2.25□□□□□ -2.05
VAPA-208ENST00000584796 TDP2O95551 362 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 TPM2P07951 284 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 SRPRAP08240 638 aaKnown RBP2.25□□□□□ -2.05
VAPA-208ENST00000584796 IGHV4-31P0DP07 118 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 ARF4P18085 180 aaPredicted RBP2.25□□□□□ -2.05
VAPA-208ENST00000584796 MX1P20591 662 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 IL10P22301 178 aa2.25□□□□□ -2.05
VAPA-208ENST00000584796 MAPK3P27361 379 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms