RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	GNB5	O14775	395 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	UGDH	O60701	494 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	CTAG2	O75638	210 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	KRT38	O76015	456 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	CLDN9	O95484	217 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	TSPAN8	P19075	237 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	XK	P51811	444 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	CRYZ	Q08257	329 aa	Known RBP	10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	CEBPE	Q15744	281 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	HSPB2	Q16082	182 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	EIPR1	Q53HC9	387 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	DCST1	Q5T197	706 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	C6orf163	Q5TEZ5	329 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	FAM180B	Q6P0A1	224 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	ZNF615	Q8N8J6	731 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	OR4K14	Q8NGD5	310 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	SPPL2A	Q8TCT8	520 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	ANP32B	Q92688	251 aa	Known RBP	10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	ADIPOR1	Q96A54	375 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	SERPINI1	Q99574	410 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	TIMP4	Q99727	224 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	BRINP2	Q9C0B6	783 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	SLC24A3	Q9HC58	644 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	FARSB	Q9NSD9	589 aa	Known RBP	10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	QPCTL	Q9NXS2	382 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	EHD3	Q9NZN3	535 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	PLEKHA6	Q9Y2H5	1048 aa		10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114	TNPO3	Q9Y5L0	923 aa	Known RBP	10.65	□□□□□ -0.7
CDK5RAP3-223	ENST00000582114		A0A1B0GTL3	188 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CAPN14	A8MX76	684 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	DVL2	O14641	736 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ERAL1	O75616	437 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	KRT15	P19012	456 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	GALNS	P34059	522 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FEN1	P39748	380 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CASP3	P42574	277 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CDK9	P50750	372 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ARFIP1	P53367	373 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NRG3	P56975	720 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FUT7	Q11130	342 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	IFT88	Q13099	833 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EXOSC7	Q15024	291 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TBCEL	Q5QJ74	424 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CCNYL2	Q5T2Q4	361 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FNDC7	Q5VTL7	733 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FRG2	Q64ET8	278 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FAM111B	Q6SJ93	734 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CCDC91	Q7Z6B0	441 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PACS2	Q86VP3	889 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SIMC1	Q8NDZ2	872 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ADCY4	Q8NFM4	1077 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TP53INP1	Q96A56	240 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FRG2B	Q96QU4	278 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TRIB1	Q96RU8	372 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SH3GL2	Q99962	352 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ANGPTL4	Q9BY76	406 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NXF5	Q9H1B4	397 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EPB41L4B	Q9H329	900 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	METTL7A	Q9H8H3	244 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ZBTB26	Q9HCK0	441 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	GALNT9	Q9HCQ5	603 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ZDHHC18	Q9NUE0	388 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NINJ2	Q9NZG7	142 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	XPR1	Q9UBH6	696 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	BCAP29	Q9UHQ4	241 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PCTP	Q9UKL6	214 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SLC12A4	Q9UP95	1085 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	C15orf41	Q9Y2V0	281 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PRRC2A	P48634	2157 aa	Known RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	AKAP6	Q13023	2319 aa		10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.64	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ANKRD33B	A6NCL7	494 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	AHRR	A9YTQ3	701 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SYT5	O00445	386 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PPP6C	O00743	305 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EEF1E1	O43324	174 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SEMA3D	O95025	777 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SNX4	O95219	450 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EPPIN	O95925	133 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	IL2RA	P01589	272 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CPM	P14384	443 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	POR	P16435	677 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	BMP7	P18075	431 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	GPX3	P22352	226 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TACR1	P25103	407 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ABCD3	P28288	659 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CEACAM8	P31997	349 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PHB	P35232	272 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TMED10	P49755	219 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ASCL1	P50553	236 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ZNF136	P52737	540 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MAPK12	P53778	367 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	DUSP2	Q05923	314 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TRAF3	Q13114	568 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	LTB4R	Q15722	352 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FBXW10	Q5XX13	1052 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms