RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 LOC100506127A0A0U1RQW1 187 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 A0A1W2PP11 408 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 BTBD17A6NE02 478 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 GAGE12JA6NER3 117 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ANTXRLA6NF34 631 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 NPIPA2E9PIF3 369 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CLDN5O00501 218 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SDHDO14521 159 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ARPC2O15144 300 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CHMP2AO43633 222 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 JAK2O60674 1132 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CDH16O75309 829 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 TM7SF2O76062 418 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 NDUFA7O95182 113 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LGI1O95970 557 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PABPC4LP0CB38 370 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CT45A8P0DMV1 189 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CT45A9P0DMV2 189 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PRKACAP17612 351 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CHRNB2P17787 502 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CDC25AP30304 524 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 USP8P40818 1118 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CDKN1BP46527 198 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SLC11A1P49279 550 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 AP3M2P53677 418 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CDH4P55283 916 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SEC61BP60468 96 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 IRX3P78415 501 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ZXDBP98169 803 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PJVKQ0ZLH3 352 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 MSLNQ13421 630 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SPHARQ15513 63 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 Q3ZCU0 254 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 NKAIN1Q4KMZ8 207 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RAB6CQ53S08 254 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CT45A2Q5DJT8 189 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF542PQ5EBM4 170 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PIP5KL1Q5T9C9 394 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PRAMEF17Q5VTA0 474 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LRRC66Q68CR7 880 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SNRNP48Q6IEG0 339 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CWC27Q6UX04 472 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 WASH2PQ6VEQ5 465 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 KDM7AQ6ZMT4 941 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 DEF8Q6ZN54 512 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CYP4V2Q6ZWL3 525 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 GOLGA7Q7Z5G4 137 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LUZP2Q86TE4 346 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 COMTD1Q86VU5 262 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SLC22A16Q86VW1 577 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 FOXRED2Q8IWF2 684 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC36Q8IYA8 594 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SPEM1Q8N4L4 309 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 AADATQ8N5Z0 425 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CPSF7Q8N684 471 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CNBD1Q8NA66 436 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SYT14Q8NB59 555 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF548Q8NEK5 533 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 DDHD1Q8NEL9 900 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ACVR1CQ8NER5 493 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RDM1Q8NG50 284 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 OR10Q1Q8NGQ4 319 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 OR4L1Q8NH43 312 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 OR52I2Q8NH67 350 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 OSR1Q8TAX0 266 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SAP25Q8TEE9 199 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 TCP11Q8WWU5 503 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 IRGQQ8WZA9 623 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RND1Q92730 232 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 COQ2Q96H96 371 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM19Q96HH6 336 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RITA1Q96K30 269 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 FAM84BQ96KN1 310 aaPredicted RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LRR1Q96L50 414 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 VSTM2LQ96N03 204 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 TSNARE1Q96NA8 513 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 AGAP3Q96P47 875 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 KRT12Q99456 494 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 NDNQ99608 321 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 CMKLR1Q99788 373 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RIOK1Q9BRS2 568 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 NDUFAF3Q9BU61 184 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 WWP1Q9H0M0 922 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 RAB6CQ9H0N0 254 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 MAGT1Q9H0U3 335 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LRMDAQ9H2I8 198 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 POLD4Q9HCU8 107 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SLC2A8Q9NY64 477 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SPHK1Q9NYA1 384 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 PTTG2Q9NZH5 202 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 LHX3Q9UBR4 397 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 AGO2Q9UKV8 859 aaKnown RBP2.85□□□□□ -1.95
KPNB1-208ENST00000580019 SLC9A8Q9Y2E8 581 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ARHGEF5Q12774 1597 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ZMYM6O95789 1325 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 ARHGEF10O15013 1369 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 KIF15Q9NS87 1388 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 C10orf71Q711Q0 1435 aa2.85□□□□□ -1.95
KPNB1-208ENST00000580019 KCPQ6ZWJ8 1503 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 NRXN3Q9Y4C0 1643 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms