RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PTPN6P29350 595 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 MC3RP41968 323 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 NAGLUP54802 743 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 ATP6V0D1P61421 351 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 RPS13P62277 151 aaKnown RBP12.17□□□□□ -0.46
COPS3-214ENST00000577246 PHEXP78562 749 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 POU4F1Q01851 419 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 FOXF2Q12947 444 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 E2F2Q14209 437 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 FNDC7Q5VTL7 733 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 PRAMEF9Q5VWM5 478 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 STEAP4Q687X5 459 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 BICRALQ6AI39 1079 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 PDPRQ8NCN5 879 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 INTS12Q96CB8 462 aaKnown RBP12.17□□□□□ -0.46
COPS3-214ENST00000577246 TUBA1CQ9BQE3 449 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 GSX2Q9BZM3 304 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 RHOJQ9H4E5 214 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 HIVEP2P31629 2446 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 GNB5O14775 395 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 CRHP06850 196 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 NR2F6P10588 404 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 NAGAP17050 411 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 PIK3CBP42338 1070 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 CBLBQ13191 982 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 SNTA1Q13424 505 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 MORF4L2Q15014 288 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 KBTBD12Q3ZCT8 623 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 C18orf63Q68DL7 685 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 SLC30A6Q6NXT4 461 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 TMEM81Q6P7N7 255 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 AAGABQ6PD74 315 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 CYP20A1Q6UW02 462 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 ANGPTL8Q6UXH0 198 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 TMEM64Q6YI46 380 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 ADGRE4PQ86SQ3 457 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 YRDCQ86U90 279 aaKnown RBP12.16□□□□□ -0.46
COPS3-214ENST00000577246 GRAMD2AQ8IUY3 354 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 GALNT12Q8IXK2 581 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 OR7G3Q8NG95 312 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 OR14L1PQ8NHC6 308 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 PIK3IP1Q96FE7 263 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 MS4A14Q96JA4 679 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 MED18Q9BUE0 208 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 OR51B5Q9H339 312 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 ACTR8Q9H981 624 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 PLAC1Q9HBJ0 212 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 C6orf203Q9P0P8 240 aaPredicted RBP12.16□□□□□ -0.46
COPS3-214ENST00000577246 PTBP2Q9UKA9 531 aaKnown RBP12.16□□□□□ -0.46
COPS3-214ENST00000577246 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
COPS3-214ENST00000577246 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 TMCC2O75069 709 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CRLF1O75462 422 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CBR3O75828 277 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CNOT4O95628 575 aaKnown RBP12.15□□□□□ -0.46
COPS3-214ENST00000577246 CCDC166P0CW27 439 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CRYGSP22914 178 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 SLCO1A2P46721 670 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 HNRNPH2P55795 449 aaKnown RBP12.15□□□□□ -0.46
COPS3-214ENST00000577246 ARL4CP56559 192 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 SRYQ05066 204 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 FBXO48Q5FWF7 155 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.46
COPS3-214ENST00000577246 OR2A2Q6IF42 318 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 IFNEQ86WN2 208 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 GCNT2Q8N0V5 402 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 OR7G1Q8NGA0 311 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 ESAMQ96AP7 390 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 SLC39A3Q9BRY0 314 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.46
COPS3-214ENST00000577246 OSBPL11Q9BXB4 747 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CXorf21Q9HAI6 301 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 TXNDC16Q9P2K2 825 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CLCF1Q9UBD9 225 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 RNF112Q9ULX5 631 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 CFL2Q9Y281 166 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 TEX264Q9Y6I9 313 aa12.15□□□□□ -0.46
COPS3-214ENST00000577246 A0A1W2PNV4 684 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 PLPP1O14494 284 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 SNPHO15079 494 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 PRKRAO75569 313 aaKnown RBP12.14□□□□□ -0.47
COPS3-214ENST00000577246 PPM1BO75688 479 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 SMNDC1O75940 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
COPS3-214ENST00000577246 CLPSP04118 112 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 EPORP19235 508 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 PTX3P26022 381 aaPredicted RBP12.14□□□□□ -0.47
COPS3-214ENST00000577246 PIK3R1P27986 724 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 ABCD3P28288 659 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 SSTR4P31391 388 aa12.14□□□□□ -0.47
COPS3-214ENST00000577246 CD79BP40259 229 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms