RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 E2F1Q01094 437 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 TMEM115Q12893 351 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CTF1Q16619 201 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CCDC58Q4VC31 144 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 SOWAHCQ53LP3 525 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CTSL3PQ5NE16 218 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 IER5LQ5T953 404 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF783Q6ZMS7 281 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 SMIM14Q96QK8 99 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 THSD1Q9NS62 852 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CUEDC1Q9NWM3 386 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 MRPS23Q9Y3D9 190 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 YIPF1Q9Y548 306 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 COCHO43405 550 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 NDUFV2P19404 249 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CDKN2CP42773 168 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CD300CQ08708 224 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 FLYWCH1Q4VC44 716 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 C1QTNF12Q5T7M4 302 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CST11Q9H112 138 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 DPP7Q9UHL4 492 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RNASET2O00584 256 aaKnown RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SCG5P05408 212 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ACADLP28330 430 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PKLRP30613 574 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GNALP38405 381 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GRK1Q15835 563 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CCL14Q16627 93 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 LRRC37A5PQ49AS3 106 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF551Q7Z340 670 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF280BQ86YH2 543 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 RIMKLAQ8IXN7 391 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR7G3Q8NG95 312 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 C16orf78Q8WTQ4 265 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 NUDT8Q8WV74 236 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 C11orf84Q9BUA3 381 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 TEX10Q9NXF1 929 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 TMEM5Q9Y2B1 443 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 LAMB1P07942 1786 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 NFKBIEO00221 500 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 NARSO43776 548 aaKnown RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 TGM1P22735 817 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 FLT3LGP49771 235 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CAV3P56539 151 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 USP51Q70EK9 711 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF227Q86WZ6 799 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR10H5Q8NGA6 315 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ECHDC3Q96DC8 303 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GPER1Q99527 375 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 B3GNT4Q9C0J1 378 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF670-ZNF695F2Z2N8 137 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 K7ERQ8 282 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GFRA2O00451 464 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 FABP7O15540 132 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 EPHX1P07099 455 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARSBP15848 533 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SELPP16109 830 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 HTR3AP46098 478 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 TBPL1P62380 186 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 RAB40BQ12829 278 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLX4IPQ5VYV7 408 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 FAM122CQ6P4D5 195 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 VASH1Q7L8A9 365 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 DBF4BQ8NFT6 615 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 QPCTLQ9NXS2 382 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PLEKHA6Q9Y2H5 1048 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PCDHGA2Q9Y5H1 932 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 A0A1B0GVC2 190 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 A6NIN4 97 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARPC5O15511 151 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GJB3O75712 270 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 PRH1P02810 166 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 ALDOBP05062 364 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 MAPK3P27361 379 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC6A6P31641 620 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
PCDHGB3-201ENST00000576222 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms