RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GRASPQ7Z6J2 395 aaPredicted RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 TFAP2DQ7Z6R9 452 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TMEM150AQ86TG1 271 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ZSWIM9Q86XI8 627 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 GID4Q8IVV7 300 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 KBTBD2Q8IY47 623 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MICU2Q8IYU8 434 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 CDK20Q8IZL9 346 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 CFAP52Q8N1V2 620 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TRAM1L1Q8N609 369 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 NATD1Q8N6N6 113 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TTC29Q8NA56 475 aaPredicted RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 GATSQ8NAP1 163 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 DTWD2Q8NBA8 298 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 CLEC1AQ8NC01 280 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 DNAAF1Q8NEP3 725 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 CADM4Q8NFZ8 388 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 OCC1Q8TAD7 63 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SPPL2BQ8TCT7 592 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ZNF398Q8TD17 642 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 PTPMT1Q8WUK0 201 aaPredicted RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 NUDT8Q8WV74 236 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TFB1MQ8WVM0 346 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 ELMO1Q92556 727 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 LPGAT1Q92604 370 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 HAS2Q92819 552 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 UBE2FQ969M7 185 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ADIPOR1Q96A54 375 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TP53INP1Q96A56 240 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 AP2M1Q96CW1 435 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SLC7A6OSQ96CW6 309 aaPredicted RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 NSMCE3Q96MG7 304 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 XPO6Q96QU8 1125 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 SLC22A12Q96S37 553 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 NDNQ99608 321 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 PRMT1Q99873 361 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 SPATA5L1Q9BVQ7 753 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 PRRG3Q9BZD7 231 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 RAB1BQ9H0U4 201 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ZBP1Q9H171 429 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MTG2Q9H4K7 406 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MANSC1Q9H8J5 431 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SRD5A3Q9H8P0 318 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SP140LQ9H930 580 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MED20Q9H944 212 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 BARX1Q9HBU1 254 aaPredicted RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 ZNF160Q9HCG1 818 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ZFP14Q9HCL3 533 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 GCM1Q9NP62 436 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 IL23AQ9NPF7 189 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 GKN1Q9NS71 199 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A13Q9NSD5 602 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 ABCC13Q9NSE7 274 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 OLAHQ9NV23 265 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMG6-208ENST00000570874 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SLCO1C1Q9NYB5 712 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 PLEK2Q9NYT0 353 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 GTSE1Q9NYZ3 720 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 NOP53Q9NZM5 478 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 MARCH2Q9P0N8 246 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 DLGAP2Q9P1A6 1054 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SEMA5BQ9P283 1151 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 PAK5Q9P286 719 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SEC14L3Q9UDX4 400 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 OR12D3Q9UGF7 316 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 IL17BQ9UHF5 180 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 DAPK2Q9UIK4 370 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 TCFL5Q9UL49 500 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 MKLN1Q9UL63 735 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 SLC12A4Q9UP95 1085 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 EIF3LQ9Y262 564 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 RHBDD3Q9Y3P4 386 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 FAM32AQ9Y421 112 aaKnown RBP3.37□□□□□ -1.87
SMG6-208ENST00000570874 YIPF1Q9Y548 306 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 WASF2Q9Y6W5 498 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 EML5Q05BV3 1969 aa3.37□□□□□ -1.87
SMG6-208ENST00000570874 EXOC1LA0A1B0GW35 172 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KANSL1LA0AUZ9 987 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 UBA6A0AVT1 1052 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ZNF840PA6NDX5 716 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 C2orf71A6NGG8 1288 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ANKRD61A6NGH8 418 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HIDE1A8MVS5 230 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HACD1B0YJ81 288 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TMEM233B4DJY2 109 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 J3KR12 359 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RAB27BO00194 218 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARNTLO00327 626 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TOR1AO14656 332 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 BCKDKO14874 412 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 GRM6O15303 877 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CCL16O15467 120 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PI15O43692 258 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KDELR3O43731 214 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PRICKLE3O43900 615 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 SELENOFO60613 162 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 UGDHO60701 494 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TRIM13O60858 407 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms