RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PTGFRNQ9P2B2 879 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 TMEM181Q9P2C4 612 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ABCD2Q9UBJ2 740 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PACSIN3Q9UKS6 424 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 CORO2BQ9UQ03 480 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PADI2Q9Y2J8 665 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 SEC16AO15027 2179 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 CDRT15L2A8MXV6 281 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 C17orf105B2RV13 164 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PLOD2O00469 737 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 DYRK3O43781 588 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PDE5AO76074 875 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 C1QCP02747 245 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 RAB40ALP0C0E4 278 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 CT62P0C5K7 136 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 TCN2P20062 427 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 GALNSP34059 522 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 STAT5AP42229 794 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PGDP52209 483 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 PRKAG1P54619 331 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 OR4D2P58180 307 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 KCNJ2P63252 427 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 DNASE1L3Q13609 305 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ELAVL1Q15717 326 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 SAMD4BQ5PRF9 694 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 FAM69BQ5VUD6 431 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 BHLHB9Q6PI77 547 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ANKRD37Q7Z713 158 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 RNF148Q8N7C7 305 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 NUP43Q8NFH3 380 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 OR2Y1Q8NGV0 311 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 NEURL3Q96EH8 262 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 CLPTM1LQ96KA5 538 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ECSITQ9BQ95 431 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 CNPPD1Q9BV87 410 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 EPS8L2Q9H6S3 715 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ANKRA2Q9H9E1 313 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 ASCL3Q9NQ33 180 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 C19orf25Q9UFG5 118 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 AP3M1Q9Y2T2 418 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 AK5Q9Y6K8 562 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 SPTBN2O15020 2390 aa14.41□□□□□ -0.1
HERPUD1-219ENST00000570273 KNTC1P50748 2209 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 PTPRBP23467 1997 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 CROCCQ5TZA2 2017 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 A0A087WV62 115 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 BRINP1O60477 761 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 IFI6P09912 130 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 NQO1P15559 274 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 EEFSECP57772 596 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 LIPEQ05469 1076 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 MGAT2Q10469 447 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 MAP4K2Q12851 820 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 ZNF267Q14586 743 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 TRMT12Q53H54 448 aaKnown RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 FHL5Q5TD97 284 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 C6orf120Q7Z4R8 191 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 RNF130Q86XS8 419 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 ULK2Q8IYT8 1036 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 OR2L13Q8N349 312 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 OR52N2Q8NGI0 321 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 OR14A16Q8NHC5 309 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 NXPE2Q96DL1 559 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 MS4A4EQ96PG1 132 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 RAB3IPQ96QF0 476 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 EQTNQ9NQ60 294 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 THSD1Q9NS62 852 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 C19orf53Q9UNZ5 99 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 ERVK-19Q9WJR5 959 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 CLCA3PQ9Y6N3 262 aa14.4□□□□□ -0.1
HERPUD1-219ENST00000570273 SCN2AQ99250 2005 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CFAP73A6NFT4 308 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 C21orf140B9A014 251 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 UPK1AO00322 258 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 PLOD3O60568 738 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 DNAJA2O60884 412 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 COQ9O75208 318 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 KLF7O75840 302 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 DXOO77932 396 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 UMODP07911 640 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 SOX18P35713 384 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 DLSTP36957 453 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CRATP43155 626 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 GSK3BP49841 420 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 KHKP50053 298 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CASP9P55211 416 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 RPS15P62841 145 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 RPS26P62854 115 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 VAC14Q08AM6 782 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CAMK2BQ13554 666 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CEACAM7Q14002 265 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 EXOSC7Q15024 291 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 CYP51A1Q16850 503 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 SFT2D3Q587I9 215 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 PIGGQ5H8A4 983 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 ERMP1Q7Z2K6 904 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 GPR155Q7Z3F1 870 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 OR10A6Q8NH74 314 aa14.39□□□□□ -0.11
HERPUD1-219ENST00000570273 PTPMT1Q8WUK0 201 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms