RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 HSD3B2P26439 372 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 SSTR4P31391 388 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 TRA2BP62995 288 aaKnown RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 SLC25A35Q3KQZ1 300 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 C1orf185Q5T7R7 199 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 COMMD6Q7Z4G1 85 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 CCDC71Q8IV32 467 aaPredicted RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 DMRTC2Q8IXT2 367 aaPredicted RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 LIX1Q8N485 282 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 ZNF615Q8N8J6 731 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 OR4F6Q8NGB9 312 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 NEIL3Q8TAT5 605 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 ZNF483Q8TF39 744 aaPredicted RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 NSUN5Q96P11 429 aaKnown RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 OR10A5Q9H207 317 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 KCNN3Q9UGI6 736 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 TRPS1Q9UHF7 1281 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 PCDHA9Q9Y5H5 950 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 FAM215AQ9Y5M1 114 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 CCDC168Q8NDH2 2452 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 EXOC1LA0A1B0GW35 172 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 LRRC3CA6NJW4 275 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 WASHC1A8K0Z3 465 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 KRT6AP02538 564 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 KRT6BP04259 564 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 ATP1B1P05026 303 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 CSNK2A2P19784 350 aaPredicted RBP13.78□□□□□ -0.2
SPG7-210ENST00000564409 ECHS1P30084 290 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
SPG7-210ENST00000564409 PEX19P40855 299 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 KRT6CP48668 564 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 NR0B1P51843 470 aaKnown RBP13.78□□□□□ -0.2
SPG7-210ENST00000564409 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 RIPPLY2Q5TAB7 128 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 PRAMEF20Q5VT98 475 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 RTL6Q6ICC9 239 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 RPRMLQ8N4K4 120 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 SPPL2AQ8TCT8 520 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 SELENOMQ8WWX9 145 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 DIO2Q92813 273 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 ADIPOR1Q96A54 375 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 FAIM2Q9BWQ8 316 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 NPDC1Q9NQX5 325 aaPredicted RBP13.78□□□□□ -0.2
SPG7-210ENST00000564409 STK38LQ9Y2H1 464 aa13.78□□□□□ -0.2
SPG7-210ENST00000564409 ANKRD17O75179 2603 aaKnown RBP13.78□□□□□ -0.2
SPG7-210ENST00000564409 A0A0G2JNJ9 132 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 NKX2-6A6NCS4 301 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 FAM90A27PA6NNH2 459 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 HSPB2A8KAH6 182 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 A8MT66 165 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 AHRRA9YTQ3 701 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 ACOX3O15254 700 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 RFPL3SP0C7P2 107 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 KRT15P19012 456 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 NT5EP21589 574 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 GDF1P27539 372 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 RASA2Q15283 850 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 HSPB2Q16082 182 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 UBAP2Q5T6F2 1119 aaKnown RBP13.77□□□□□ -0.21
SPG7-210ENST00000564409 CES4AQ5XG92 561 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 OTOGQ6ZRI0 2925 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 TRMT10CQ7L0Y3 403 aaKnown RBP13.77□□□□□ -0.21
SPG7-210ENST00000564409 PM20D2Q8IYS1 436 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 SAMD14Q8IZD0 417 aaPredicted RBP13.77□□□□□ -0.21
SPG7-210ENST00000564409 VWA5B2Q8N398 1253 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 TMEM151AQ8N4L1 468 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 ZNF592Q92610 1267 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 HSPBAP1Q96EW2 488 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 JSRP1Q96MG2 331 aaPredicted RBP13.77□□□□□ -0.21
SPG7-210ENST00000564409 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 UCK2Q9BZX2 261 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 SPRR3Q9UBC9 169 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 VPS29Q9UBQ0 182 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 Q9UFV3 132 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 CES1P1Q9UKY3 287 aa13.77□□□□□ -0.21
SPG7-210ENST00000564409 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 PDYNP01213 254 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 ENDOUP21128 410 aaKnown RBP13.76□□□□□ -0.21
SPG7-210ENST00000564409 S1PR1P21453 382 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 HSD17B3P37058 310 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 FBXW4P57775 412 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 DCAF7P61962 342 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 PSPHP78330 225 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 CLCQ05315 142 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 GALNT1Q10472 559 aaPredicted RBP13.76□□□□□ -0.21
SPG7-210ENST00000564409 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
SPG7-210ENST00000564409 SNTA1Q13424 505 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 PRICKLE4Q2TBC4 344 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 SGO1Q5FBB7 561 aa13.76□□□□□ -0.21
SPG7-210ENST00000564409 CDH24Q86UP0 819 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms