RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 WBP4O75554 376 aaKnown RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TYRP1P17643 537 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 DCKP27707 260 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 SMAD2Q15796 467 aaKnown RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 GTF2IRD2BQ6EKJ0 949 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 DEF8Q6ZN54 512 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 WDR53Q7Z5U6 358 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 GTF2IRD2Q86UP8 949 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 PARGQ86W56 976 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 FAM46DQ8NEK8 389 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 NUP43Q8NFH3 380 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 OR56A1Q8NGH5 318 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 GTPBP3Q969Y2 492 aaKnown RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ALPK1Q96QP1 1244 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 NODALQ96S42 347 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TUBA1CQ9BQE3 449 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ERVK-18Q9QC07 812 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ENTPD2Q9Y5L3 495 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 A0A0J9YY10 115 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 SEC14L2O76054 403 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 CCNB2O95067 398 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 EPPINO95925 133 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 WNT1P04628 370 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 PCMT1P22061 227 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 CBLP22681 906 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 PPP2R1BP30154 601 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 KRT20P35900 424 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 BUD31P41223 144 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-203ENST00000563226 MAPK10P53779 464 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 HHEXQ03014 270 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 FAM111BQ6SJ93 734 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 ALDH16A1Q8IZ83 802 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 CAMKVQ8NCB2 501 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 SIMC1Q8NDZ2 872 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 ZDHHC1Q8WTX9 485 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 OR7D2Q96RA2 312 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 FOXQ1Q9C009 403 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 CCDC90BQ9GZT6 254 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 QRSL1Q9H0R6 528 aaKnown RBP17.98■□□□□ 0.47
SMPD3-203ENST00000563226 DAPP1Q9UN19 280 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 RNF6Q9Y252 685 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 POFUT2Q9Y2G5 429 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 KLK4Q9Y5K2 254 aa17.98■□□□□ 0.47
SMPD3-203ENST00000563226 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 FAM221BA6H8Z2 402 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 OR5K4A6NMS3 321 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 H3BMQ9 156 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 M0R3H8 397 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 ATE1O95260 518 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 JUNDP17535 347 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 TTKP33981 857 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 CRISP3P54108 245 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 PRR5P85299 388 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 UBXN2BQ14CS0 331 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 LRIT3Q3SXY7 679 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF770Q6IQ21 691 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-203ENST00000563226 RNF44Q7L0R7 432 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 ERI1Q8IV48 349 aaKnown RBP17.97■□□□□ 0.47
SMPD3-203ENST00000563226 AQP11Q8NBQ7 271 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 MIPOL1Q8TD10 442 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 GIMAP5Q96F15 307 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 COG8Q96MW5 612 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 NMNAT1Q9HAN9 279 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-203ENST00000563226 STARD5Q9NSY2 213 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 DUSP12Q9UNI6 340 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 HCN4Q9Y3Q4 1203 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 B3GALT2O43825 422 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 SERPINB7O75635 380 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 CTSBP07858 339 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 GGT2P36268 569 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 MAN2A2P49641 1150 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 SLC35A2P78381 396 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 SEC23BQ15437 767 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 COLEC12Q5KU26 742 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 C6orf132Q5T0Z8 1188 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 BHLHB9Q6PI77 547 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 NLGN4XQ8N0W4 816 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 TAGAPQ8N103 731 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 OR7G2Q8NG99 324 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 BBS10Q8TAM1 723 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 RERGQ96A58 199 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-203ENST00000563226 COL26A1Q96A83 441 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 MOAP1Q96BY2 351 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 DOK1Q99704 481 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 PSD2Q9BQI7 771 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 ROGDIQ9GZN7 287 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 BCL2L10Q9HD36 194 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 PHF11Q9UIL8 331 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 PSME2Q9UL46 239 aa17.97■□□□□ 0.47
SMPD3-203ENST00000563226 KRBA1A5PL33 1030 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 OR5K3A6NET4 321 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 A8MVJ9 347 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF701M0R085 212 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-203ENST00000563226 GASTP01350 101 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 ALOX12P18054 663 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 XKP51811 444 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 MAZP56270 477 aaKnown RBP17.96■□□□□ 0.47
SMPD3-203ENST00000563226 NUP107P57740 925 aa17.96■□□□□ 0.47
SMPD3-203ENST00000563226 ID2Q02363 134 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms