RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 Q6ZS92 163 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 FUNDC1Q8IVP5 155 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 RIMKLAQ8IXN7 391 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 OR7A2PQ8NGA2 310 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 OR4K14Q8NGD5 310 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 COQ8BQ96D53 544 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ZNF764Q96H86 408 aaPredicted RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 BARD1Q99728 777 aaKnown RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 NPAS2Q99743 824 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ZNF717Q9BY31 904 aaPredicted RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 RPF2Q9H7B2 306 aaKnown RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 IL1RL2Q9HB29 575 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 SEMA3GQ9NS98 782 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 TAS2R7Q9NYW3 318 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 DHCR7Q9UBM7 475 aaKnown RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 BCAP29Q9UHQ4 241 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 UTS2RQ9UKP6 389 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 DAPP1Q9UN19 280 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ASB4Q9Y574 426 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 PCDHA9Q9Y5H5 950 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 A0A1W2PR48 441 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 H3BMH7 237 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 PDPK1O15530 556 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 DYRK3O43781 588 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 RDH16O75452 317 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ERAL1O75616 437 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 CIB2O75838 187 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 DNAJC8O75937 253 aaPredicted RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 CD63P08962 238 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 LAMP1P11279 417 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 FBLP22087 321 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 PPIBP23284 216 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 PGM1P36871 562 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 GABRA4P48169 554 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 RAB38P57729 211 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 TNFRSF17Q02223 184 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 OCA2Q04671 838 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 STX4Q12846 297 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 SLC13A2Q13183 592 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 SSPNQ14714 243 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 TRMT5Q32P41 509 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 SPDYE7PQ495Y7 208 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 MRM1Q6IN84 353 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 ZNF793Q6ZN11 406 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 DHDDSQ86SQ9 333 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ZNF595Q8IYB9 648 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ZADH2Q8N4Q0 377 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 DPP10Q8N608 796 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 OR4A15Q8NGL6 344 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 OR2Y1Q8NGV0 311 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.03□□□□□ -0.64
LDLR-212ENST00000560467 EXOSC8Q96B26 276 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 TEX37Q96LM6 180 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 IP6K3Q96PC2 410 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 MAPKAP1Q9BPZ7 522 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 LRMDAQ9H2I8 198 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 SLC35C2Q9NQQ7 365 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ADA2Q9NZK5 511 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 IFT80Q9P2H3 777 aaPredicted RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 GPN3Q9UHW5 284 aaPredicted RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 FBXL4Q9UKA2 621 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 PRPF19Q9UMS4 504 aaKnown RBP11.03□□□□□ -0.64
LDLR-212ENST00000560467 CORO2BQ9UQ03 480 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 ATG4BQ9Y4P1 393 aa11.03□□□□□ -0.64
LDLR-212ENST00000560467 POLQO75417 2590 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 A0A096LPI6 279 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 ZNF860A6NHJ4 632 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 C9JVG2 144 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 H0YHG0 523 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 LRRTM2O43300 516 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 CPSF4O95639 269 aaKnown RBP11.02□□□□□ -0.65
LDLR-212ENST00000560467 AIFM1O95831 613 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 ITGAXP20702 1163 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 CAPN3P20807 821 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 ITGA3P26006 1051 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 IL12AP29459 219 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 ANXA11P50995 505 aaKnown RBP11.02□□□□□ -0.65
LDLR-212ENST00000560467 PSME3P61289 254 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 DCDP81605 110 aaKnown RBP11.02□□□□□ -0.65
LDLR-212ENST00000560467 PDE7AQ13946 482 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 RUNX2Q13950 521 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 DSG2Q14126 1118 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 SPATS1Q496A3 300 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 MFSD4BQ5TF39 518 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 OR4F3Q6IEY1 312 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 RHBDD2Q6NTF9 364 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 SLC48A1Q6P1K1 146 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 SLC2A7Q6PXP3 512 aa11.02□□□□□ -0.65
LDLR-212ENST00000560467 BNC2Q6ZN30 1099 aaPredicted RBP11.02□□□□□ -0.65
LDLR-212ENST00000560467 C10orf67Q8IYJ2 551 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms