RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SLC36A3Q495N2 470 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 GTF2IRD2BQ6EKJ0 949 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 GRHL2Q6ISB3 625 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 COMMD6Q7Z4G1 85 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 GTF2IRD2Q86UP8 949 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF317Q96PQ6 595 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 FN3KQ9H479 309 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PLOD2O00469 737 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 HRGP04196 525 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.35
TRAF3-208ENST00000560371 CLDN8P56748 225 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 SWT1Q5T5J6 900 aaKnown RBP12.83□□□□□ -0.35
TRAF3-208ENST00000560371 TMED4Q7Z7H5 227 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 LAS2Q8IYD9 372 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM130Q8N3G9 435 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 THAP4Q8WY91 577 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 MTG2Q9H4K7 406 aa12.83□□□□□ -0.35
TRAF3-208ENST00000560371 STOX2Q9P2F5 926 aaPredicted RBP12.83□□□□□ -0.35
TRAF3-208ENST00000560371 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 OR52A4PA6NMU1 304 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 E7ESA3 106 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 AP2S1P53680 142 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-208ENST00000560371 DCDC1P59894 354 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
TRAF3-208ENST00000560371 DNASE1L3Q13609 305 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TAS2R10Q9NYW0 307 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 LRRC42Q9Y546 428 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 RHCEP18577 417 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 PGGT1BP53609 377 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 ERMP1Q7Z2K6 904 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 OR8K3Q8NH51 312 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 HOXD1Q9GZZ0 328 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TOR3AQ9H497 397 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TRNAU1APQ9NX07 287 aaKnown RBP12.83□□□□□ -0.36
TRAF3-208ENST00000560371 CDRT1O95170 752 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF35P13682 527 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 CDK10Q15131 360 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 SLC25A25Q6KCM7 469 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 RANBP10Q6VN20 620 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 CPXM2Q8N436 756 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TOMM5Q8N4H5 51 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TYROBPO43914 113 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 KDELR2P33947 212 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 PTCRAQ6ISU1 281 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-208ENST00000560371 BEND4Q6ZU67 534 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TMEM151BQ8IW70 566 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 CREB3L4Q8TEY5 395 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 PGAM5Q96HS1 289 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 AIFM2Q9BRQ8 373 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 SLC12A9Q9BXP2 914 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 ABCD2Q9UBJ2 740 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 SCGB1D2O95969 90 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 GCGRP47871 477 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 SOX2P48431 317 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 EMP2P54851 167 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 MARCH8Q5T0T0 291 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 BMFQ96LC9 184 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 ACTR10Q9NZ32 417 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 PTGDR2Q9Y5Y4 395 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 ACTL7AQ9Y615 435 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
TRAF3-208ENST00000560371 TEX13DA0A0J9YY54 714 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-208ENST00000560371 FTCDNL1E5RQL4 147 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CRYGNQ8WXF5 182 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 RFT1Q96AA3 541 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 DTD2Q96FN9 168 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 PIP5K1AQ99755 562 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 IRF2BPLQ9H1B7 796 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 PREBQ9HCU5 417 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 FAAHO00519 579 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CAV3P56539 151 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 SLC7A9P82251 487 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 KIR2DS3Q14952 304 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 HMBOX1Q6NT76 420 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 TRIM73Q86UV7 250 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 C3orf58Q8NDZ4 430 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 OR8H1Q8NGG4 311 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 GXYLT2A0PJZ3 443 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CD63P08962 238 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CELP19835 753 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 FDXRP22570 491 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 HOXC13P31276 330 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CDKN3Q16667 212 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 PNCKQ6P2M8 343 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAF3-208ENST00000560371 TP53INP2Q8IXH6 220 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 SGTBQ96EQ0 304 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 MKS1Q9NXB0 559 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 PTRH2Q9Y3E5 179 aaKnown RBP12.82□□□□□ -0.36
TRAF3-208ENST00000560371 A0A0J9YY10 115 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-208ENST00000560371 HSD11B2P80365 405 aa12.82□□□□□ -0.36
TRAF3-208ENST00000560371 CDK3Q00526 305 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms