RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 MID1IP1Q9NPA3 183 aa16.22■□□□□ 0.19
SMAD3-210ENST00000559092 OXSMQ9NWU1 459 aa16.22■□□□□ 0.19
SMAD3-210ENST00000559092 ZNF639Q9UID6 485 aa16.22■□□□□ 0.19
SMAD3-210ENST00000559092 CHCHD2Q9Y6H1 151 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-210ENST00000559092 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
SMAD3-210ENST00000559092 A0A1B0GVC2 190 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 SMIM23A6NLE4 172 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 FOXO6A8MYZ6 492 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 UBFD1O14562 309 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 COPEO14579 308 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TP53I11O14683 189 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 HNRNPRO43390 633 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 PCDH7O60245 1069 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 ERAL1O75616 437 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 PDE9AO76083 593 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 CPA3P15088 417 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 CHN1P15882 459 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 PIGAP37287 484 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 FEN1P39748 380 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TMED10P49755 219 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 NR0B1P51843 470 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 NRG3P56975 720 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 SLC18A2Q05940 514 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 MGAT2Q10469 447 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 SLC10A1Q14973 349 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 HEPACAMQ14CZ8 416 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 ZNF630Q2M218 657 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 PRICKLE4Q2TBC4 344 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TBCELQ5QJ74 424 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TRIM46Q7Z4K8 759 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 HOMEZQ8IX15 550 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 RIBC1Q8N443 379 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 FAM13CQ8NE31 585 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 OR10G3Q8NGC4 313 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 EPS8L3Q8TE67 593 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 CTHRC1Q96CG8 243 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 RUBCNLQ9H714 662 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 ZFP64Q9NPA5 681 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TUBA8Q9NY65 449 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 MID2Q9UJV3 735 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 UTS2RQ9UKP6 389 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 BOKQ9UMX3 212 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 DLGAP4Q9Y2H0 992 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 WBP11Q9Y2W2 641 aaKnown RBP16.21■□□□□ 0.19
SMAD3-210ENST00000559092 TIMM22Q9Y584 194 aa16.21■□□□□ 0.19
SMAD3-210ENST00000559092 CRYBG3Q68DQ2 2970 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 GNG14A0A1W2PPG7 69 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 ZNHIT1O43257 154 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 SUSD5O60279 629 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 TPOP07202 933 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 NUDT17P0C025 328 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 NAGAP17050 411 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 HTR1EP28566 365 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 DNASE1L1P49184 302 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 ALDH9A1P49189 494 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 HTR6P50406 440 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 KCNJ2P63252 427 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 RAE1P78406 368 aaKnown RBP16.2■□□□□ 0.18
SMAD3-210ENST00000559092 HMGCS1Q01581 520 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 TMEM211Q6ICI0 200 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 MMP21Q8N119 569 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 LRRC25Q8N386 305 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-210ENST00000559092 FAM76AQ8TAV0 307 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 ERP27Q96DN0 273 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 CNRIP1Q96F85 164 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-210ENST00000559092 APIPQ96GX9 242 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 KCNA7Q96RP8 456 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 TP63Q9H3D4 680 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-210ENST00000559092 QPCTLQ9NXS2 382 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 MAT2BQ9NZL9 334 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 EHD3Q9NZN3 535 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 CNOT11Q9UKZ1 510 aaKnown RBP16.2■□□□□ 0.18
SMAD3-210ENST00000559092 NPFFR2Q9Y5X5 522 aa16.2■□□□□ 0.18
SMAD3-210ENST00000559092 ITPR2Q14571 2701 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 BCKDKO14874 412 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 HCN1O60741 890 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 CRCPO75575 148 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 BCAS2O75934 225 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-210ENST00000559092 IL3P08700 152 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 TIA1P31483 386 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMAD3-210ENST00000559092 MAGEA5P43359 124 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 DCAF7P61962 342 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 RPP38P78345 283 aaKnown RBP16.19■□□□□ 0.18
SMAD3-210ENST00000559092 RPS6KA2Q15349 733 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 SPDYAQ5MJ70 313 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 LIPMQ5VYY2 423 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 TRILQ7L0X0 811 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 CD163Q86VB7 1156 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 CCDC63Q8NA47 563 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 C16orf78Q8WTQ4 265 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 METTL2AQ96IZ6 378 aaKnown RBP16.19■□□□□ 0.18
SMAD3-210ENST00000559092 BRINP2Q9C0B6 783 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 PROK2Q9HC23 129 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 MKS1Q9NXB0 559 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 HEY2Q9UBP5 337 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 PRODH2Q9UF12 536 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 MYO7BQ6PIF6 2116 aa16.19■□□□□ 0.18
SMAD3-210ENST00000559092 CROCCQ5TZA2 2017 aa16.18■□□□□ 0.18
SMAD3-210ENST00000559092 AQP7O14520 342 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms