RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RAP2AP10114 183 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 GGT1P19440 569 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CD22P20273 847 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 ARL1P40616 181 aaPredicted RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 HTR6P50406 440 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 HNRNPFP52597 415 aaKnown RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 MLLT10P55197 1068 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 ABATP80404 500 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 EPS8Q12929 822 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 NR6A1Q15406 480 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CPSF6Q16630 551 aaKnown RBP eCLIP9.69□□□□□ -0.86
TPM1-212ENST00000558347 PRTGQ2VWP7 1150 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 FAM214AQ32MH5 1076 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CYBRD1Q53TN4 286 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 DCAF10Q5QP82 559 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CCNYL2Q5T2Q4 361 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 FAM219BQ5XKK7 198 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 GLYATQ6IB77 296 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 NXPE4Q6UWF7 544 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 SHISA6Q6ZSJ9 500 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 FAM9CQ8IZT9 166 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 ABHD11Q8NFV4 315 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 FAM110BQ8TC76 370 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CYGBQ8WWM9 190 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 DOK1Q99704 481 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 C1orf50Q9BV19 199 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CHID1Q9BWS9 393 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 UGT2B28Q9BY64 529 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 PITHD1Q9GZP4 211 aaPredicted RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 SLC26A1Q9H2B4 701 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 SOX17Q9H6I2 414 aaPredicted RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 RPF2Q9H7B2 306 aaKnown RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 NT5DC2Q9H857 520 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 WDR54Q9H977 334 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 P4HTMQ9NXG6 502 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 SH2B3Q9UQQ2 575 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 EIF3LQ9Y262 564 aaKnown RBP9.69□□□□□ -0.86
TPM1-212ENST00000558347 TSC22D4Q9Y3Q8 395 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 CCL27Q9Y4X3 112 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 PCDHGA11Q9Y5H2 935 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 GMEB1Q9Y692 573 aa9.69□□□□□ -0.86
TPM1-212ENST00000558347 TRIM64BA6NI03 449 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 VSTM2BA6NLU5 285 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 SOCS6O14544 535 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 HAT1O14929 419 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 TPST1O60507 370 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ALOX12BO75342 701 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 CCNDBP1O95273 360 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ALBP02768 609 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 G6PDP11413 515 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 JUNBP17275 347 aaPredicted RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 IL1RNP18510 177 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 MMP11P24347 488 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 CXCR2P25025 360 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 PCSK6P29122 969 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 HLCSP50747 726 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ALDH3A2P51648 485 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 OR4D2P58180 307 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 SNRPNP63162 240 aaKnown RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 CHRNB3Q05901 458 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 DAG1Q14118 895 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ABRAXAS2Q15018 415 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 KIAA0040Q15053 153 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 HKDC1Q2TB90 917 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 AP5B1Q2VPB7 878 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 PAGE2BQ5JRK9 111 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 CATSPEREQ5SY80 951 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 FRG2Q64ET8 278 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 SLC2A7Q6PXP3 512 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ISLR2Q6UXK2 745 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ADCK2Q7Z695 626 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 TMPRSS11BQ86T26 416 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 GPR180Q86V85 440 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 PLD3Q8IV08 490 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 LAS2Q8IYD9 372 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 GALNT16Q8N428 558 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 OR4K1Q8NGD4 311 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 WDR20Q8TBZ3 569 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 UBE2E3Q969T4 207 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 MIB2Q96AX9 1013 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ISOC1Q96CN7 298 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 REPS1Q96D71 796 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 IP6K3Q96PC2 410 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 FRG2BQ96QU4 278 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 OR2A5Q96R48 311 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 SMAD5Q99717 465 aaKnown RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 MESP1Q9BRJ9 268 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ELOVL6Q9H5J4 265 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 GPR83Q9NYM4 423 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 ZNF490Q9ULM2 529 aaPredicted RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 RUVBL1Q9Y265 456 aaKnown RBP9.68□□□□□ -0.86
TPM1-212ENST00000558347 ZNF451Q9Y4E5 1061 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 PCDHGB7Q9Y5F8 929 aa9.68□□□□□ -0.86
TPM1-212ENST00000558347 A0A1B0GVG6 124 aa9.67□□□□□ -0.86
TPM1-212ENST00000558347 H7BY64 318 aa9.67□□□□□ -0.86
TPM1-212ENST00000558347 PEX12O00623 359 aa9.67□□□□□ -0.86
TPM1-212ENST00000558347 FFAR3O14843 346 aa9.67□□□□□ -0.86
TPM1-212ENST00000558347 GPR42O15529 346 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms