RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RIT1Q92963 219 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 PPWD1Q96BP3 646 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 STARD4Q96DR4 205 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ZBED6CLQ96FA7 236 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 PGM2Q96G03 612 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ZC3HAV1LQ96H79 300 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 FBXL20Q96IG2 436 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 RILPQ96NA2 401 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 F2RL3Q96RI0 385 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 EGFL8Q99944 293 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 MAPKAP1Q9BPZ7 522 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 PELOQ9BRX2 385 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 WWTR1Q9GZV5 400 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 RPF2Q9H7B2 306 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 XAB2Q9HCS7 855 aaKnown RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 SNX15Q9NRS6 342 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 TEX10Q9NXF1 929 aaPredicted RBP4.71□□□□□ -1.66
SPG11-208ENST00000558155 MS4A12Q9NXJ0 267 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 GPRC5BQ9NZH0 403 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 MAPRE3Q9UPY8 281 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 ROS1P08922 2347 aa4.71□□□□□ -1.66
SPG11-208ENST00000558155 MED12Q93074 2177 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 A0A1W2PNV4 684 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 FRG2CA6NGY1 282 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 LRRC14BA6NHZ5 514 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 HRKO00198 91 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 FGF17O60258 216 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 OR10H2O60403 315 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TNFSF13O75888 250 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 GPR75O95800 540 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 AHSGP02765 367 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 PPP3CBP16298 524 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 NAGAP17050 411 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 HIST1H1TP22492 207 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 PTPN6P29350 595 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 GALNSP34059 522 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 THBS2P35442 1172 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 UGT2B10P36537 528 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ANP32AP39687 249 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 MAGEA6P43360 314 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 SLC6A12P48065 614 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 CDKN2DP55273 166 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 SLC37A1P57057 533 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 RPS4XP62701 263 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 HERVK_113P63132 956 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ERVK-8P63133 956 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 FUT7Q11130 342 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 SLAMF1Q13291 335 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 FGFBP1Q14512 234 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 EBPQ15125 230 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 TRIP13Q15645 432 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 KBTBD12Q3ZCT8 623 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TMEM35AQ53FP2 167 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 PAGE2BQ5JRK9 111 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 DCST1Q5T197 706 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 RBM20Q5T481 1227 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 FNDC7Q5VTL7 733 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 BICRALQ6AI39 1079 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ZNF474Q6S9Z5 364 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 SBSNQ6UWP8 590 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ANGPTL8Q6UXH0 198 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TMEM64Q6YI46 380 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 NUP54Q7Z3B4 507 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 GPR180Q86V85 440 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ST13P4Q8IZP2 240 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 GCNT2Q8N0V5 402 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 NKAPQ8N5F7 415 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 CNEP1R1Q8N9A8 125 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 OR14L1PQ8NHC6 308 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 IGFBPL1Q8WX77 278 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 CAVIN3Q969G5 261 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 UBE2E3Q969T4 207 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 RHBDF1Q96CC6 855 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TRIM44Q96DX7 344 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 ZNF845Q96IR2 970 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 VPS39Q96JC1 886 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 SIGLEC10Q96LC7 697 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ERVK-6Q9BXR3 956 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 BEX2Q9BXY8 128 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 TRIM5Q9C035 493 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 PHACTR1Q9C0D0 580 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 KLHL4Q9C0H6 718 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 EHD1Q9H4M9 534 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 METTL7AQ9H8H3 244 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ACTR8Q9H981 624 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 FANCFQ9NPI8 374 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 PSD3Q9NYI0 1048 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 CLCF1Q9UBD9 225 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 CDC42EP3Q9UKI2 254 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 ZNF490Q9ULM2 529 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 EXO1Q9UQ84 846 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 ERVK-19Q9WJR5 959 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 DLGAP4Q9Y2H0 992 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 REXO2Q9Y3B8 237 aaKnown RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
SPG11-208ENST00000558155 RAI1Q7Z5J4 1906 aaPredicted RBP4.7□□□□□ -1.66
SPG11-208ENST00000558155 STAB1Q9NY15 2570 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms