RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MTRF1LQ9UGC7 380 aaKnown RBP14.58□□□□□ -0.08
TUBB3-213ENST00000557262 PCTPQ9UKL6 214 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 IKBKGQ9Y6K9 419 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 HSPB2A8KAH6 182 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 GUCY1B2O75343 617 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 ACSL3O95573 720 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 EPPINO95925 133 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 CPMP14384 443 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 PORP16435 677 aaPredicted RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 TMED10P49755 219 aaKnown RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 SERPINB9P50453 376 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 FBXW4P57775 412 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 RPP38P78345 283 aaKnown RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 IFT88Q13099 833 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 TRAF3Q13114 568 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 DUSP8Q13202 625 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 RPS6KA2Q15349 733 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 HSPB2Q16082 182 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 TSNAXIP1Q2TAA8 658 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 UBAP2Q5T6F2 1119 aaKnown RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 C6orf163Q5TEZ5 329 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 ARSKQ6UWY0 536 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 WDR53Q7Z5U6 358 aaPredicted RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 PACS2Q86VP3 889 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 METTL4Q8N3J2 472 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 C17orf47Q8NEP4 570 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 OR7G1Q8NGA0 311 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 TIMP4Q99727 224 aa14.57□□□□□ -0.08
TUBB3-213ENST00000557262 MRPL1Q9BYD6 325 aaKnown RBP14.57□□□□□ -0.08
TUBB3-213ENST00000557262 C2CD3Q4AC94 2353 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 SPG11Q96JI7 2443 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 MED13LQ71F56 2210 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 C15orf38-AP3S2A0A0A6YYH1 394 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 C1orf226A1L170 272 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 SYT5O00445 386 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 TRAPPC6AO75865 159 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 KRT38O76015 456 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 ZWINTO95229 277 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 S1PR1P21453 382 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 NT5EP21589 574 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 CASP3P42574 277 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 SF3B4Q15427 424 aaKnown RBP eCLIP14.56□□□□□ -0.087e-7■■■■□ 24
TUBB3-213ENST00000557262 GGTA1PQ4G0N0 100 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 SGO1Q5FBB7 561 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 SEM1Q6ZVN7 128 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 OR4F6Q8NGB9 312 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 RILPQ96NA2 401 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 MRPL57Q9BQC6 102 aaKnown RBP14.56□□□□□ -0.08
TUBB3-213ENST00000557262 ELOVL6Q9H5J4 265 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 XPR1Q9UBH6 696 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 CES1P1Q9UKY3 287 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 L3MBTL1Q9Y468 752 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 PCDHA9Q9Y5H5 950 aa14.56□□□□□ -0.08
TUBB3-213ENST00000557262 HPNP05981 417 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CD1EP15812 388 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 NAGAP17050 411 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CEACAM8P31997 349 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-213ENST00000557262 DEKP35659 375 aaKnown RBP14.55□□□□□ -0.08
TUBB3-213ENST00000557262 PEX19P40855 299 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 MASP1P48740 699 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CDK9P50750 372 aaKnown RBP14.55□□□□□ -0.08
TUBB3-213ENST00000557262 MAPK12P53778 367 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CRYZQ08257 329 aaKnown RBP14.55□□□□□ -0.08
TUBB3-213ENST00000557262 MAP4K2Q12851 820 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 FNDC7Q5VTL7 733 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 BICRALQ6AI39 1079 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 VASNQ6EMK4 673 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 SLC48A1Q6P1K1 146 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 TAOK1Q7L7X3 1001 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 PM20D2Q8IYS1 436 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 GNRHR2Q96P88 292 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 PAFAH2Q99487 392 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 UBQLN3Q9H347 655 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CDC42EP4Q9H3Q1 356 aaKnown RBP14.55□□□□□ -0.08
TUBB3-213ENST00000557262 NMRK1Q9NWW6 199 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 PSME2Q9UL46 239 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 SLC12A4Q9UP95 1085 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 CFL2Q9Y281 166 aa14.55□□□□□ -0.08
TUBB3-213ENST00000557262 NCKAP5O14513 1909 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 GOLGA6L10A6NI86 522 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 DVL2O14641 736 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 CDH16O75309 829 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 URI1O94763 535 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 OTCP00480 354 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 PDYNP01213 254 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 ABCB1P08183 1280 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 KRT15P19012 456 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 CSNK2A2P19784 350 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 GPX3P22352 226 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 CNTFP26441 200 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 ABCD3P28288 659 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 TIMP3P35625 211 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 KIR2DL3P43628 341 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 MGAT2Q10469 447 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 PRICKLE4Q2TBC4 344 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 RPS27LQ71UM5 84 aaKnown RBP14.54□□□□□ -0.08
TUBB3-213ENST00000557262 COMMD6Q7Z4G1 85 aa14.54□□□□□ -0.08
TUBB3-213ENST00000557262 PRR22Q8IZ63 422 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms