RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ANKRD9Q96BM1 317 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 SGCZQ96LD1 299 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 MECRQ9BV79 373 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 GATA5Q9BWX5 397 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 ALOXE3Q9BYJ1 711 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 LYRM4Q9HD34 91 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 Q9UFV3 132 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 ADGRE2Q9UHX3 823 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 ZNF225Q9UK10 706 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 PCDHGA11Q9Y5H2 935 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 DNAJC13O75165 2243 aa9.89□□□□□ -0.83
HNRNPC-230ENST00000557201 A0A1B0GTL3 188 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FAM221AA4D161 298 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ANKDD1BA6NHY2 528 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 UBFD1O14562 309 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SUSD5O60279 629 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 NPHS1O60500 1241 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CTAG2O75638 210 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SNUPNO95149 360 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SCELO95171 688 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ETHE1O95571 254 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 IGKV3-11P04433 115 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 IFNA16P05015 189 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CCL3P10147 92 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 GRK2P25098 689 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 PIK3CBP42338 1070 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ZFP36L2P47974 494 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 IST1P53990 364 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 IGLV3-21P80748 117 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 MPEG1Q2M385 716 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ZNF791Q3KP31 576 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 HSP90B2PQ58FF3 399 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 PIGGQ5H8A4 983 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 HHATQ5VTY9 493 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 LETMD1Q6P1Q0 360 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ZNF585AQ6P3V2 769 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 B3GNT6Q6ZMB0 384 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 GPRIN3Q6ZVF9 776 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CLYBLQ8N0X4 340 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 OR4F6Q8NGB9 312 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SLC2A12Q8TD20 617 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CCT6BQ92526 530 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 REPS1Q96D71 796 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 F2RL3Q96RI0 385 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FOXC2Q99958 501 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 OR8D2Q9GZM6 311 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 PROK2Q9HC23 129 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 TUBA8Q9NY65 449 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 PSD3Q9NYI0 1048 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 RNF11Q9Y3C5 154 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ATG4BQ9Y4P1 393 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 EML6Q6ZMW3 1958 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 C17orf105B2RV13 164 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FOXE1O00358 373 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 WDR1O75083 606 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 LDB3O75112 727 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 NADKO95544 446 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SERPINE1P05121 402 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ENO1P06733 434 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FGF4P08620 206 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 TSPAN8P19075 237 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ATP5A1P25705 553 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 HPDP32754 393 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 DNASE1L1P49184 302 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 PPP2R2AP63151 447 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 STX4Q12846 297 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SERTAD2Q14140 314 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 RCN2Q14257 317 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CPSF6Q16630 551 aaKnown RBP eCLIP9.88□□□□□ -0.833e-7■■■□□ 15.6
HNRNPC-230ENST00000557201 FRG2Q64ET8 278 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 OPN5Q6U736 354 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 TMEM200AQ86VY9 491 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 MYLK4Q86YV6 388 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ACOT4Q8N9L9 421 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 OR5L2Q8NGL0 311 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 NUBPLQ8TB37 319 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 WDR20Q8TBZ3 569 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ZNF473Q8WTR7 871 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 NINJ1Q92982 152 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 KCNC2Q96PR1 638 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 FRG2BQ96QU4 278 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 MAPKAP1Q9BPZ7 522 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 CNPPD1Q9BV87 410 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 MS4A8Q9BY19 250 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SACM1LQ9NTJ5 587 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 SPRR3Q9UBC9 169 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 TRPS1Q9UHF7 1281 aa9.88□□□□□ -0.83
HNRNPC-230ENST00000557201 ATP6AP2A0A1C7CYW4 349 aa9.87□□□□□ -0.83
HNRNPC-230ENST00000557201 LRRC3CA6NJW4 275 aa9.87□□□□□ -0.83
HNRNPC-230ENST00000557201 TMEM114B3SHH9 223 aa9.87□□□□□ -0.83
HNRNPC-230ENST00000557201 RTCAO00442 366 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-230ENST00000557201 FGF17O60258 216 aa9.87□□□□□ -0.83
HNRNPC-230ENST00000557201 HCN1O60741 890 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms