RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 UBFD1O14562 309 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SMAD6O43541 496 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 UGT2B11O75310 529 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 BCAS1O75363 584 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ATP6AP2O75787 350 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GABARAPO95166 117 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SCELO95171 688 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MT-CYBP00156 380 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FGF1P05230 155 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HLA-DQB2P05538 268 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RPS17P08708 135 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CSF1P09603 554 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FAM90A13PP0C7W8 464 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FAM90A24PP0C7X0 464 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CD1DP15813 335 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 IL1RNP18510 177 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GGT1P19440 569 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HLA-DPA1P20036 260 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MSH3P20585 1137 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HRH2P25021 359 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 IL12AP29459 219 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CCR1P32246 355 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RYKP34925 604 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HPCAL1P37235 193 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 OPRL1P41146 370 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 PCYT1AP49585 367 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 PLK1P53350 603 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 PLA2G16P53816 162 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CDKN2DP55273 166 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CXCR4P61073 352 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MRPS6P82932 125 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ECT2LQ008S8 904 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GNA12Q03113 381 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ACVR1Q04771 509 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RAD51Q06609 339 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MGAT3Q09327 533 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CDC20Q12834 499 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CAPRIN1Q14444 709 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GRB7Q14451 532 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 INAQ16352 499 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CTXN3Q4LDR2 81 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GLYATQ6IB77 296 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RETSATQ6NUM9 610 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF549Q6P9A3 640 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CD300LGQ6UXG3 332 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CYHR1Q6ZMK1 362 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 R3HCC1LQ7Z5L2 792 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ADCK1Q86TW2 530 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ISCA2Q86U28 154 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 TAC4Q86UU9 113 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 IFNEQ86WN2 208 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HEATR4Q86WZ0 1026 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZFAND4Q86XD8 727 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GPSM1Q86YR5 675 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HIPK1Q86Z02 1210 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 LACC1Q8IV20 430 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SCN4BQ8IWT1 228 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ADHFE1Q8IWW8 467 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 EID3Q8N140 333 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZCCHC7Q8N3Z6 543 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FBXO39Q8N4B4 442 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RTL3Q8N8U3 475 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ATP6V0D2Q8N8Y2 350 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CHDHQ8NE62 594 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZMIZ2Q8NF64 920 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 BPIFB6Q8NFQ5 453 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 OR7A2PQ8NGA2 310 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 OR5K1Q8NHB7 308 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 STAG3L4Q8TBR4 150 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 C2CD4CQ8TF44 421 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 PHF10Q8WUB8 498 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ASB5Q8WWX0 329 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 STARD8Q92502 1023 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 TMBIM1Q969X1 311 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FBXL8Q96CD0 374 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 IMP4Q96G21 291 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 LYZL4Q96KX0 146 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SENP8Q96LD8 212 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 C3orf30Q96M34 536 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF599Q96NL3 588 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MUS81Q96NY9 551 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 NODALQ96S42 347 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZBTB18Q99592 522 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 NPAS1Q99742 590 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SH3GL1Q99961 368 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 RTP3Q9BQQ7 232 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 DERL2Q9GZP9 239 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 NAA50Q9GZZ1 169 aaKnown RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 LHPPQ9H008 270 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 MAGIXQ9H6Y5 334 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 GORASP2Q9H8Y8 452 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SP140LQ9H930 580 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 CSNK1G1Q9HCP0 422 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 Q9N2J8 555 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FZD3Q9NPG1 666 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SLC52A3Q9NQ40 469 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HEBP1Q9NRV9 189 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms