RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 OR51B5Q9H339 312 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 RHOJQ9H4E5 214 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 TEX10Q9NXF1 929 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-221ENST00000556571 NSMCE4AQ9NXX6 385 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 GALNT8Q9NY28 637 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 CD274Q9NZQ7 290 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 ADGRE2Q9UHX3 823 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 PTBP2Q9UKA9 531 aaKnown RBP10.85□□□□□ -0.67
ACTN1-221ENST00000556571 NPFFR2Q9Y5X5 522 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 NCKAP5O14513 1909 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
ACTN1-221ENST00000556571 RCBTB2O95199 551 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 CLPSP04118 112 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 SLC35E2BP0CK96 405 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 SLC35E2P0CK97 266 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 CPN1P15169 458 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 IVDP26440 423 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 RAP1GDS1P52306 607 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 ARFIP1P53367 373 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 NAGLUP54802 743 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 ATP6V0D1P61421 351 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 EEF1A1P68104 462 aaKnown RBP10.84□□□□□ -0.67
ACTN1-221ENST00000556571 PPP2R2BQ00005 443 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 POU4F1Q01851 419 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 CKAP4Q07065 602 aaKnown RBP10.84□□□□□ -0.67
ACTN1-221ENST00000556571 FOXF2Q12947 444 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 CALCOCO2Q13137 446 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 SETDB1Q15047 1291 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 DCST1Q5T197 706 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 EEF1A1P5Q5VTE0 462 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 TIGD3Q6B0B8 471 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 LRRC70Q7Z2Q7 622 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 PDPRQ8NCN5 879 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 SPATA4Q8NEY3 305 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 WNT2BQ93097 391 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 TSPAN17Q96FV3 270 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 TMEM41AQ96HV5 264 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 Q96MF0 132 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
ACTN1-221ENST00000556571 SORBS1Q9BX66 1292 aaKnown RBP10.84□□□□□ -0.67
ACTN1-221ENST00000556571 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 ACBD3Q9H3P7 528 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 PIGMQ9H3S5 423 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 MOCS1Q9NZB8 636 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
ACTN1-221ENST00000556571 MED12Q93074 2177 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 FAM187AA6NFU0 413 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 GNB5O14775 395 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 URI1O94763 535 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 WISP3O95389 354 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 S100BP04271 92 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 CD1DP15813 335 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 FPR1P21462 350 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 PTPN6P29350 595 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 PIK3CBP42338 1070 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 SLCO1A2P46721 670 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 DIO3P55073 304 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 HNRNPH2P55795 449 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 ARL4CP56559 192 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 GAB1Q13480 694 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 OR4D1Q15615 310 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 SCIMPQ6UWF3 145 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 YTHDF3Q7Z739 585 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 ADGRE4PQ86SQ3 457 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 YRDCQ86U90 279 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 OR1J4Q8NGS1 313 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 SLC44A1Q8WWI5 657 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 INTS12Q96CB8 462 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 UCN2Q96RP3 112 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 TUBA1CQ9BQE3 449 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 MCMBPQ9BTE3 642 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 WDR41Q9HAD4 459 aa10.83□□□□□ -0.68
ACTN1-221ENST00000556571 LYARQ9NX58 379 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 UTP11Q9Y3A2 253 aaKnown RBP10.83□□□□□ -0.68
ACTN1-221ENST00000556571 GLOD5A6NK44 160 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 WASHC1A8K0Z3 465 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 A8MXE2 369 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 KIF2AO00139 706 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-221ENST00000556571 PLPP1O14494 284 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 CTIFO43310 598 aaKnown RBP10.82□□□□□ -0.68
ACTN1-221ENST00000556571 PRKRAO75569 313 aaKnown RBP10.82□□□□□ -0.68
ACTN1-221ENST00000556571 SEC31AO94979 1220 aaKnown RBP10.82□□□□□ -0.68
ACTN1-221ENST00000556571 NR2F6P10588 404 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 NAGAP17050 411 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 KRT15P19012 456 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 CHMP24386 653 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 PTX3P26022 381 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-221ENST00000556571 SSTR4P31391 388 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 SOX18P35713 384 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 PCYT1AP49585 367 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 FUT7Q11130 342 aa10.82□□□□□ -0.68
ACTN1-221ENST00000556571 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms