RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 TMEM64Q6YI46 380 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 RBM45Q8IUH3 476 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 GJD3Q8N144 294 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 RLIMQ9NVW2 624 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 CLCA2Q9UQC9 943 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM32AQ9Y421 112 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SLC22A7Q9Y694 548 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 DMDP11532 3685 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 ADAMDEC1O15204 470 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CHRM4P08173 479 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 NXPH1P58417 271 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 PRR5P85299 388 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 FUT5Q11128 374 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 RAPSNQ13702 412 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 GPAT3Q53EU6 434 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 NKAIN2Q5VXU1 208 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM111BQ6SJ93 734 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 LRRC25Q8N386 305 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CAMKK1Q8N5S9 505 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF655Q8N720 491 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 C19orf47Q8N9M1 422 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 OR7G2Q8NG99 324 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 NRBF2Q96F24 287 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF347Q96SE7 839 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 FEVQ99581 238 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 QRSL1Q9H0R6 528 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 THSD1Q9NS62 852 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 KLHL3Q9UH77 587 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 PCDH17O14917 1159 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 IFNW1P05000 195 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 PROS1P07225 676 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 ITGA2P17301 1181 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 AGXTP21549 392 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 XCR1P46094 333 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 GSSP48637 474 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CLK3P49761 638 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CD47Q08722 323 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CEBPEQ15744 281 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 RFX4Q33E94 735 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 BHLHB9Q6PI77 547 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 IQCHQ86VS3 1027 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 SLC5A8Q8N695 610 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 OR56A1Q8NGH5 318 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 C1orf216Q8TAB5 229 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 SFXN5Q8TD22 340 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 GIPC3Q8TF64 312 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 SGCDQ92629 289 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 PROX1Q92786 737 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CLDN23Q96B33 292 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 OR7D2Q96RA2 312 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF607Q96SK3 696 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 YIPF2Q9BWQ6 316 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 C3orf14Q9HBI5 128 aa17.21■□□□□ 0.35
SDR39U1-220ENST00000556548 CCDC88CQ9P219 2028 aa17.21■□□□□ 0.34
SDR39U1-220ENST00000556548 K7ESF4 209 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 RDH16O75452 317 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 PPP2R1BP30154 601 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 IL5RAQ01344 420 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 COMTD1Q86VU5 262 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 MCATQ8IVS2 390 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 TTC29Q8NA56 475 aaPredicted RBP17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 OR9Q2Q8NGE9 314 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 OR4D11Q8NGI4 311 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 OR9A4Q8NGU2 314 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 TGM7Q96PF1 710 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 PIP5K1AQ99755 562 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 RBCK1Q9BYM8 510 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 DDX18Q9NVP1 670 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 ENPP4Q9Y6X5 453 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 A0A087WXM4 84 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 TMEM221A6NGB7 291 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 VILLO15195 856 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 JRKO75564 520 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 POU2F1P14859 743 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 ALDH4A1P30038 563 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 FASLGP48023 281 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 RXRGP48443 463 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 GFERP55789 205 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 HNRNPKP61978 463 aaKnown RBP eCLIP17.2■□□□□ 0.348e-10■□□□□ 10.3
SDR39U1-220ENST00000556548 RELAQ04206 551 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 ZNF691Q5VV52 312 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 FAHD1Q6P587 224 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 DEF8Q6ZN54 512 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 Q6ZPB1 254 aaPredicted RBP17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 LACC1Q8IV20 430 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 OR10G2Q8NGC3 310 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 CNIH3Q8TBE1 160 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 ACER3Q9NUN7 267 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 MUTYHQ9UIF7 546 aa17.2■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC16A6O15403 523 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 FGF17O60258 216 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 GALR3O60755 368 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 DPM1O60762 260 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 PDE9AO76083 593 aa17.19■□□□□ 0.34
SDR39U1-220ENST00000556548 MYF5P13349 255 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms