RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
TGFB3-204ENST00000556285 QPCTLQ9NXS2 382 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 DNAJB12Q9NXW2 375 aaKnown RBP12.17□□□□□ -0.46
TGFB3-204ENST00000556285 PSD3Q9NYI0 1048 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 NINJ2Q9NZG7 142 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 SLC6A5Q9Y345 797 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
TGFB3-204ENST00000556285 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ANKRD33BA6NCL7 494 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 PPP6CO00743 305 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 CTAG2O75638 210 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TRAPPC6AO75865 159 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 S1PR1P21453 382 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 PIK3R1P27986 724 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 UQCRC1P31930 480 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 SOX18P35713 384 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 SERPINB8P50452 374 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 XKP51811 444 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 DUSP2Q05923 314 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 FUT7Q11130 342 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TBL3Q12788 808 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TRAF3Q13114 568 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 RPS6KA2Q15349 733 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 NNATQ16517 81 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ACSF3Q4G176 576 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 EIPR1Q53HC9 387 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 DCST1Q5T197 706 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TMEM198Q66K66 360 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 KLC3Q6P597 504 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 POMZP3Q6PJE2 187 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 FAM111BQ6SJ93 734 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ZNF572Q7Z3I7 529 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 CCDC91Q7Z6B0 441 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 GALNT12Q8IXK2 581 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 DND1Q8IYX4 353 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TAGAPQ8N103 731 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ATP6V1E2Q96A05 226 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TP53INP1Q96A56 240 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 SH3GL2Q99962 352 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 GPATCH1Q9BRR8 931 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 ANGPTL4Q9BY76 406 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 OR10A5Q9H207 317 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 UBQLN3Q9H347 655 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 WDR41Q9HAD4 459 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 CRIM1Q9NZV1 1036 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 B4GALT7Q9UBV7 327 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 PCTPQ9UKL6 214 aa12.16□□□□□ -0.46
TGFB3-204ENST00000556285 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
TGFB3-204ENST00000556285 CCDC189A1A4V9 331 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 C2orf72A6NCS6 295 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 SEMA3DO95025 777 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 EPPINO95925 133 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CPMP14384 443 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CD1EP15812 388 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 TSPAN8P19075 237 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 NT5EP21589 574 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 BMP5P22003 454 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 GPX3P22352 226 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CEACAM8P31997 349 aaPredicted RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CASP3P42574 277 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CCNG1P51959 295 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 AGFG1P52594 562 aaKnown RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 ZNF136P52737 540 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 MGAT2Q10469 447 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 EXOSC7Q15024 291 aaKnown RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 KRTAP21-3Q3LHN1 58 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 HLA-DQA1Q5Y7H0 255 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 FRG2Q64ET8 278 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 OR4K14Q8NGD5 310 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 FRG2BQ96QU4 278 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 NTMT1Q9BV86 223 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 POLDIP3Q9BY77 421 aaKnown RBP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 ACSS3Q9H6R3 686 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 CES1P1Q9UKY3 287 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 C15orf41Q9Y2V0 281 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 PCDHGB3Q9Y5G1 929 aa12.15□□□□□ -0.46
TGFB3-204ENST00000556285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
TGFB3-204ENST00000556285 NIPBLQ6KC79 2804 aaeCLIP12.14□□□□□ -0.47
TGFB3-204ENST00000556285 HSPB2A8KAH6 182 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 SYT5O00445 386 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 TP53I11O14683 189 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 GNB5O14775 395 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 HPNP05981 417 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 ABCB1P08183 1280 aaPredicted RBP12.14□□□□□ -0.47
TGFB3-204ENST00000556285 SBK3P0C264 359 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 BMP7P18075 431 aa12.14□□□□□ -0.47
TGFB3-204ENST00000556285 ABCD3P28288 659 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms