RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 FAM90A27PA6NNH2 459 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 WASHC1A8K0Z3 465 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 GBAP04062 536 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 KLK1P06870 262 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 ABHD2P08910 425 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 HSD3B1P14060 373 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 CPMP14384 443 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 PORP16435 677 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 POU3F2P20265 443 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 HSD3B2P26439 372 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 SSTR4P31391 388 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 XKP51811 444 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 MAPK12P53778 367 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 MAP4K2Q12851 820 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 TESK1Q15569 626 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 CCNYL2Q5T2Q4 361 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 LGSNQ5TDP6 509 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 C6orf163Q5TEZ5 329 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 PRAMEF20Q5VT98 475 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 HLA-DQA1Q5Y7H0 255 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 TMEM198Q66K66 360 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 SPNS3Q6ZMD2 512 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 TIFABQ6ZNK6 161 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 COMMD6Q7Z4G1 85 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 SPPL2AQ8TCT8 520 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 SREK1Q8WXA9 508 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 MTBPQ96DY7 904 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 ANGPTL4Q9BY76 406 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 UCK2Q9BZX2 261 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 OR10A5Q9H207 317 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 UBQLN3Q9H347 655 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 SPRR3Q9UBC9 169 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 Q9UFV3 132 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 TRPS1Q9UHF7 1281 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 PCDHA9Q9Y5H5 950 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 POLQO75417 2590 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 A8MT66 165 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 AHRRA9YTQ3 701 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 TRIM49D1C9J1S8 452 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 HPNP05981 417 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 SNRPAP09012 282 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 SBK3P0C264 359 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 CT62P0C5K7 136 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 S1PR1P21453 382 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 KRTAP10-9P60411 292 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 GALNT1Q10472 559 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.544e-14■■■□□ 17.3
HNRNPC-221ENST00000555883 PRICKLE4Q2TBC4 344 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 NHSL2Q5HYW2 709 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 LETMD1Q6P1Q0 360 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 CDH24Q86UP0 819 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 PM20D2Q8IYS1 436 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 ULK2Q8IYT8 1036 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 VWA5B2Q8N398 1253 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 OR10Q1Q8NGQ4 319 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 DIO2Q92813 273 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 CTHRC1Q96CG8 243 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 TMEM41AQ96HV5 264 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 EXO5Q9H790 373 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 FETUBQ9UGM5 382 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF639Q9UID6 485 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 SLC12A4Q9UP95 1085 aa11.65□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF407Q9C0G0 2248 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 A0A1W2PS29 197 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 HSPB2A8KAH6 182 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 ACOX3O15254 700 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CTAGE8P0CG41 777 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CSNK2A2P19784 350 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 GPX3P22352 226 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 GDF1P27539 372 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 ABCD3P28288 659 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 TIMP3P35625 211 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 ADH7P40394 386 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CASP3P42574 277 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 FBXW4P57775 412 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 DCAF7P61962 342 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 PSPHP78330 225 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CSTF3Q12996 717 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 SNTA1Q13424 505 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 RASA2Q15283 850 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 HSPB2Q16082 182 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CES4AQ5XG92 561 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 CTAGE4Q8IX94 777 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 LIX1Q8N485 282 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 SELENOMQ8WWX9 145 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 IFT81Q8WYA0 676 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 UCN3Q969E3 161 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 ERP27Q96DN0 273 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 HSPBAP1Q96EW2 488 aa11.64□□□□□ -0.55
HNRNPC-221ENST00000555883 RILPQ96NA2 401 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms