RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DEC1Q9P2X7 70 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TMEM98Q9Y2Y6 226 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 LSM2Q9Y333 95 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 CAB39Q9Y376 341 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 MRPS23Q9Y3D9 190 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 PRKAB1Q9Y478 270 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 FEZF1A0PJY2 475 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 HYKKA2RU49 373 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ZNF670-ZNF695F2Z2N8 137 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 H7BY64 318 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CTDSP2O14595 271 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TLX2O43763 284 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 COQ9O75208 318 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GUCY1B2O75343 617 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CSO75390 466 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 CCNKO75909 580 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NFATC1O95644 943 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 F12P00748 615 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 OR12D1P0DN82 309 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ERGP11308 486 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ACADMP11310 421 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CEBPBP17676 345 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TNFSF8P32971 234 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CTNNB1P35222 781 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 IFNGR2P38484 337 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 FRKP42685 505 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 SMSP52788 366 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 OR2B6P58173 313 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NTHL1P78549 312 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 MLC1Q15049 377 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NDUFA5Q16718 116 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 LRIT3Q3SXY7 679 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TCEAL5Q5H9L2 206 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 C9orf64Q5T6V5 341 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 AGAP6Q5VW22 663 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 RSBN1Q5VWQ0 802 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 PSRC1Q6PGN9 363 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 CD300LDQ6UXZ3 194 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 USP30Q70CQ3 517 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GDPD3Q7L5L3 318 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 C11orf96Q7Z7L8 435 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 FAM26EQ8N5C1 309 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NANOGP1Q8N7R0 232 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TTLQ8NG68 377 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SLC7A13Q8TCU3 470 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SUSD6Q92537 303 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NR4A3Q92570 626 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NXPE3Q969Y0 559 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 RAB7BQ96AH8 199 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 PRAP1Q96NZ9 151 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 AGAP4Q96P64 663 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 BBS4Q96RK4 519 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ZNF717Q9BY31 904 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 POLDIP3Q9BY77 421 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 PRRG3Q9BZD7 231 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ABCG4Q9H172 646 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 OR51I1Q9H343 314 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SIRT3Q9NTG7 399 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 ZCCHC3Q9NUD5 404 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 C14orf119Q9NWQ9 140 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ERVK13-1Q9NX77 482 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 QPCTLQ9NXS2 382 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 C5AR2Q9P296 337 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CLEC2DQ9UHP7 191 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SLC13A4Q9UKG4 626 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ACAD8Q9UKU7 415 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 DIMT1Q9UNQ2 313 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 GRIP1Q9Y3R0 1128 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CMAHPQ9Y471 501 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 HCFC2Q9Y5Z7 792 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 PTPRSQ13332 1948 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NOTCH4Q99466 2003 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 HEATR5BQ9P2D3 2071 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 IQCMA0A1B0GVH7 501 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 CASC3O15234 703 aaKnown RBP6.61□□□□□ -1.35
TDP1-213ENST00000555880 TPST2O60704 377 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 CLEC3AO75596 197 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 IL1AP01583 271 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 PCCBP05166 539 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 IGFBP1P08833 259 aaPredicted RBP6.61□□□□□ -1.35
TDP1-213ENST00000555880 ADRA2AP08913 450 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 TSPAN19P0C672 248 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 GSTT2P0CG29 244 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 GSTT2BP0CG30 244 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 NR2F6P10588 404 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 FUT4P22083 530 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 IFNA8P32881 189 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 RPS19P39019 145 aaKnown RBP6.61□□□□□ -1.35
TDP1-213ENST00000555880 BUD31P41223 144 aaPredicted RBP6.61□□□□□ -1.35
TDP1-213ENST00000555880 NCBP2P52298 156 aaKnown RBP eCLIP6.61□□□□□ -1.35
TDP1-213ENST00000555880 SCN1BQ07699 218 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 PIN1Q13526 163 aaPredicted RBP6.61□□□□□ -1.35
TDP1-213ENST00000555880 SYPL1Q16563 259 aa6.61□□□□□ -1.35
TDP1-213ENST00000555880 TMEM35AQ53FP2 167 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms