RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SPATA2Q9UM82 520 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 NUBP2Q9Y5Y2 271 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ZAR1LA6NP61 321 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 SUV39H1O43463 412 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 RPLP2P05387 115 aaKnown RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 AVPR1BP47901 424 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 GDI2P50395 445 aaKnown RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 CLDN8P56748 225 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 RPS7P62081 194 aaKnown RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 RPS14P62263 151 aaKnown RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 CPSF6Q16630 551 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 UGT8Q16880 541 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 FAM26DQ5JW98 314 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 KRT74Q7RTS7 529 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 MCATQ8IVS2 390 aaKnown RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 SYT14Q8NB59 555 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 PIH1D2Q8WWB5 315 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 OR6C75A6NL08 312 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 GAPDHSO14556 408 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 EPB42P16452 691 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 BPIP17213 487 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 ITPKAP23677 461 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 DGKAP23743 735 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 TACR1P25103 407 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 CNR2P34972 360 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 HNMTP50135 292 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 DGKKQ5KSL6 1271 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 MZT2AQ6P582 158 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 ASB18Q6ZVZ8 466 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 LAS2Q8IYD9 372 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 FAM46DQ8NEK8 389 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 ATF6BQ99941 703 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYNE3-203ENST00000554873 DPAGT1Q9H3H5 408 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 GKN1Q9NS71 199 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 NDUFAF4Q9P032 175 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 EDARQ9UNE0 448 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 GSTK1Q9Y2Q3 226 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 SNX11Q9Y5W9 270 aa14.85□□□□□ -0.03
SYNE3-203ENST00000554873 LOC105369274A0A096LPK9 316 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 CLIC1O00299 241 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 GATCO43716 136 aaKnown RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 EOMESO95936 686 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ASGR1P07306 291 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SYPP08247 313 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 JUPP14923 745 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 BTCP35070 178 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 CAPZA2P47755 286 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 NTRK2Q16620 822 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PLK5Q496M5 336 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 USP30Q70CQ3 517 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TSEN54Q7Z6J9 526 aaKnown RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PAQR7Q86WK9 346 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 OR4N4Q8N0Y3 316 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 OR52J3Q8NH60 311 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 MOSPD2Q8NHP6 518 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 C1GALT1C1Q96EU7 318 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TSSK3Q96PN8 268 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 BCL2L14Q9BZR8 327 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 BABAM2Q9NXR7 383 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PPT2Q9UMR5 302 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 NPTNQ9Y639 398 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SLC38A8A6NNN8 435 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 G3V3Q6 166 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 CASKO14936 926 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 RGS11O94810 467 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PDYNP01213 254 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ENGP17813 658 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 HNF1BP35680 557 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TSPAN5P62079 268 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 VEZF1Q14119 521 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 EXOC3L2Q2M3D2 409 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ATXN7L2Q5T6C5 722 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SLC38A3Q99624 504 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SARGQ9BW04 601 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ASB8Q9H765 288 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 LHX3Q9UBR4 397 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 FTSJ1Q9UET6 329 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ING1Q9UK53 422 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PCOLCE2Q9UKZ9 415 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 DTX4Q9Y2E6 619 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PIKFYVEQ9Y2I7 2098 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TOXO94900 526 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ECDO95905 644 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 GPX2P18283 190 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SSTP61278 116 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SPIBQ01892 262 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 DSG2Q14126 1118 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 ARHGEF7Q14155 803 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 CRTC2Q53ET0 693 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 GPRC6AQ5T6X5 926 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 CXorf57Q6NSI4 855 aaKnown RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 TMEM91Q6ZNR0 172 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SLC24A5Q71RS6 500 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 OTOP2Q7RTS6 562 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 LAPTM4BQ86VI4 370 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms