RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MAPKAPK3Q16644 382 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 IL23RQ5VWK5 629 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 METTL21CQ5VZV1 264 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 ACSM2BQ68CK6 577 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 SLC25A25Q6KCM7 469 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 NOXRED1Q6NXP6 359 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 PDSS2Q86YH6 399 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 HORMAD2Q8N7B1 307 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 FNDC5Q8NAU1 212 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 RGMAQ96B86 450 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 LPAR4Q99677 370 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 NMUR2Q9GZQ4 415 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 MYLK2Q9H1R3 596 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 DDX31Q9H8H2 851 aaKnown RBP13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 NMRK1Q9NWW6 199 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 GPR45Q9Y5Y3 372 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 SLC22A7Q9Y694 548 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 PKDREJQ9NTG1 2253 aa13.05□□□□□ -0.32
SPTLC2-202ENST00000554365 DCHS2Q6V1P9 2916 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 A0A0A6YYD5 115 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 ANKRD28O15084 1053 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 UBDO15205 165 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 TMPRSS11DO60235 418 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 DNAJB6O75190 326 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 NEURL1O76050 574 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 KLK1P06870 262 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CD1EP15812 388 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 ZNF24P17028 368 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CAPN3P20807 821 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 ATP5A1P25705 553 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 RAP1GDS1P52306 607 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 OR4D2P58180 307 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 TAS2R50P59544 299 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 TLE4Q04727 773 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 OR4C11Q6IEV9 310 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 MRM1Q6IN84 353 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CDH24Q86UP0 819 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 DOLPP1Q86YN1 238 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 SIAH3Q8IW03 269 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 CPSF7Q8N684 471 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 TSLPQ969D9 159 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 C14orf79Q96F83 325 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 KCNC2Q96PR1 638 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 TBCDQ9BTW9 1192 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 BRINP2Q9C0B6 783 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 SAR1AQ9NR31 198 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 LRFN1Q9P244 771 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 MCM8Q9UJA3 840 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 C2CD3Q4AC94 2353 aa13.04□□□□□ -0.32
SPTLC2-202ENST00000554365 NCOA6Q14686 2063 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 FCHO1O14526 889 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 PRRG2O14669 202 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 PCDH7O60245 1069 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 GALR3O60755 368 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 GBAP04062 536 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 G6PDP11413 515 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 ALOX12P18054 663 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 GPX3P22352 226 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 HIST1H1TP22492 207 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 CERS1P27544 350 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 SSR2P43308 183 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 ATP4BP51164 291 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 SLC26A5P58743 744 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 BTN3A2P78410 334 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 RHAGQ02094 409 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 MAD2L1Q13257 205 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 TRIM40Q6P9F5 258 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 CYP20A1Q6UW02 462 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 MEX3BQ6ZN04 569 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 MTDHQ86UE4 582 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 ZCCHC7Q8N3Z6 543 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 LIX1Q8N485 282 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 ACOT4Q8N9L9 421 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 SRFBP1Q8NEF9 429 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 CA5BP1Q8WTZ4 195 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 SDR39U1Q9NRG7 319 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-202ENST00000554365 TACC2O95359 2948 aa13.02□□□□□ -0.32
SPTLC2-202ENST00000554365 SCN2AQ99250 2005 aa13.02□□□□□ -0.33
SPTLC2-202ENST00000554365 URADA6NGE7 173 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms