RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 A0A0G2JPF8 293 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 URADA6NGE7 173 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 HNRNPCL2B2RXH8 293 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 HNRNPCL3B7ZW38 293 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MT-ND2P03891 347 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 HNRNPCL4P0DMR1 293 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 POU2F1P14859 743 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 CPN2P22792 545 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 BUD31P41223 144 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MC3RP41968 323 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MAP2K4P45985 399 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 GSSP48637 474 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MAPK10P53779 464 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 TNFRSF17Q02223 184 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FZD2Q14332 565 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ZNF542PQ5EBM4 170 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MLIPQ5VWP3 458 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 DEF8Q6ZN54 512 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 OLIG3Q7RTU3 272 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 LACC1Q8IV20 430 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ZCCHC10Q8TBK6 192 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KLHL6Q8WZ60 621 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FKBP10Q96AY3 582 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 CSF3RQ99062 836 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 WFDC6Q9BQY6 131 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KLHL25Q9H0H3 589 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 GPN2Q9H9Y4 310 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 GPR27Q9NS67 375 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 WSB2Q9NYS7 404 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 WARS2Q9UGM6 360 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KCNE3Q9Y6H6 103 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 LOC105369274A0A096LPK9 316 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 LOC102723532A0A0G2JNH3 316 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 H1F0P07305 194 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 THEGLP0DJG4 465 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ELAVL4P26378 380 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ACVR2AP27037 513 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 LSSP48449 732 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 MAN2A2P49641 1150 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SMIM11AP58511 58 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 NFATC3Q12968 1075 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 RUNX2Q13950 521 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 LTB4RQ15722 352 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 DCST1Q5T197 706 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 FRMPD2BQ6IN97 320 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 KLHL17Q6TDP4 642 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 TAF8Q7Z7C8 310 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SFTPA2Q8IWL1 248 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 OR4N4Q8N0Y3 316 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 RORBQ92753 470 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 OR7D2Q96RA2 312 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SIGLEC11Q96RL6 698 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ZFYVE21Q9BQ24 234 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 BTBD2Q9BX70 525 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 SLC2A4RGQ9NR83 387 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
RAB3IP-216ENST00000552199 H0YGG7 62 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 FAAHO00519 579 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 ASNA1O43681 348 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 B3GALT2O43825 422 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 CHRNB1P11230 501 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 SRFP11831 508 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 GABRB1P18505 474 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 MASP1P48740 699 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 ARF3P61204 181 aaPredicted RBP13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 TEKQ02763 1124 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 GPAT3Q53EU6 434 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 ABHD13Q7L211 337 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 SYT13Q7L8C5 426 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 ANKRD13BQ86YJ7 626 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
RAB3IP-216ENST00000552199 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms