RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	QPCTL	Q9NXS2	382 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RDH8	Q9NYR8	311 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	FLRT3	Q9NZU0	649 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RNF123	Q5XPI4	1314 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	AKNA	Q7Z591	1439 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	COL2A1	P02458	1487 aa	Predicted RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009		A0A087X002	238 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	HEATR9	A2RTY3	570 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	OR6C74	A6NCV1	312 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ANKRD61	A6NGH8	418 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	VGLL3	A8MV65	326 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	NPIPA3	F8WFD2	350 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PDXK	O00764	312 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CHMP2A	O43633	222 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ACSL4	O60488	711 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	NADK	O95544	446 aa	Predicted RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	LGI1	O95970	557 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	MT-ND1	P03886	318 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	EDN1	P05305	212 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	APRT	P07741	180 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SP9	P0CG40	484 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	GNS	P15586	552 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PRKACA	P17612	351 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	MX1	P20591	662 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	U2AF2	P26368	475 aa	Known RBP eCLIP	4.08	□□□□□ -1.76	2e-8	■■■□□ 17.8
ATP2B1-208	ENST00000551009	ANXA13	P27216	316 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	GRIA1	P42261	906 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	MAGEA11	P43364	429 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TNFRSF4	P43489	277 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SLC6A8	P48029	635 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	FNTA	P49354	379 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ACADVL	P49748	655 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PPT1	P50897	306 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SMARCA4	P51532	1647 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SLC8A3	P57103	927 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	RBBP7	Q16576	425 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	RABGAP1L	Q5R372	815 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	LIN9	Q5TKA1	542 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PRAMEF5	Q5TYX0	476 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PRAMEF6	Q5VXH4	476 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TTC23	Q5W5X9	447 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PDPK2P	Q6A1A2	396 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	NIPAL3	Q6P499	406 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ERICH5	Q6P6B1	374 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	BLOC1S2	Q6QNY1	142 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SIGLEC15	Q6ZMC9	328 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SH2D5	Q6ZV89	423 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ADGRD2	Q7Z7M1	963 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ISCA2	Q86U28	154 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	VPS36	Q86VN1	386 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	APCDD1	Q8J025	514 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CRYBG2	Q8N1P7	616 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TRIML2	Q8N7C3	387 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	BPIFC	Q8NFQ6	507 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	OR9A1P	Q8NGU1	263 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PNPT1	Q8TCS8	783 aa	Known RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	C17orf50	Q8WW18	174 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SSMEM1	Q8WWF3	244 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	HAVCR1	Q96D42	359 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	MTERF3	Q96E29	417 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ARL5B	Q96KC2	179 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	C12orf66	Q96MD2	445 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TSSK2	Q96PF2	358 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CBWD1	Q9BRT8	395 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TMEM43	Q9BTV4	400 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PRRG4	Q9BZD6	226 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	MRPL37	Q9BZE1	423 aa	Known RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	AUNIP	Q9H7T9	357 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SGK2	Q9HBY8	427 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	FGF22	Q9HCT0	170 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PTTG2	Q9NZH5	202 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PKD2L2	Q9NZM6	624 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PEF1	Q9UBV8	284 aa	Known RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	NARF	Q9UHQ1	456 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	NOCT	Q9UK39	431 aa	Known RBP	4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	RNF215	Q9Y6U7	377 aa		4.08	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CHD1	O14646	1710 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ZNF608	Q9ULD9	1512 aa	Predicted RBP	4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	HEG1	Q9ULI3	1381 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	TMEM89	A2RUT3	159 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	WASH3P	C4AMC7	463 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009		M0R296	226 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ARHGEF9	O43307	516 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	OR10H2	O60403	315 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	FCMR	O60667	390 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	LRP3	O75074	770 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	DNAJB6	O75190	326 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CDH16	O75309	829 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PIGN	O95427	931 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	SYNGR4	O95473	234 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CPNE6	O95741	557 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	GSR	P00390	522 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	CA3	P07451	260 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	FRMD6-AS1	P0C7T7	363 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	ZNF853	P0CG23	659 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PNMT	P11086	282 aa		4.07	□□□□□ -1.76
ATP2B1-208	ENST00000551009	PPP2R1A	P30153	589 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms