RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NIPAL2Q9H841 368 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 PCDHGA2Q9Y5H1 932 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 TRBV23OR9-2A0A075B6M9 112 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 ARPC5O15511 151 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 ACP5P13686 325 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 HRH2P25021 359 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 ACVR1BP36896 505 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 CLCNKAP51800 687 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 GPR143P51810 404 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 MLLT11Q13015 90 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 APOFQ13790 326 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 TATDN3Q17R31 274 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.29□□□□□ -0.125e-10■■■□□ 16.7
SMARCA4-207ENST00000541122 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM124AQ86V42 546 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 HCAR2Q8TDS4 363 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 ELP5Q8TE02 316 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 GKN1Q9NS71 199 aa14.29□□□□□ -0.12
SMARCA4-207ENST00000541122 SMCO3A2RU48 225 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 KRBOX1C9JBD0 128 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 UGDHO60701 494 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 AHSA1O95433 338 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 HTR6P50406 440 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ARSDP51689 593 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ZNF648Q5T619 568 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 WASH2PQ6VEQ5 465 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 MCEMP1Q8IX19 187 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ZFP41Q8N8Y5 198 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CD300AQ9UGN4 299 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 YIPF1Q9Y548 306 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 A0A0U1RQF3 1178 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 BLOC1S5-TXNDC5H3BN57 136 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ZNF26P17031 533 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CERS1P27544 350 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 DOC2AQ14183 400 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CDNFQ49AH0 187 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CNTN4Q8IWV2 1026 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 PGAP3Q96FM1 320 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 TMEM175Q9BSA9 504 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 NAA50Q9GZZ1 169 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 GOSR2O14653 212 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 SFTPBP07988 381 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CSF1P09603 554 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 TRAPPC2P0DI81 140 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 TRAPPC2BP0DI82 140 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ETFAP13804 333 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 FGL2Q14314 439 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 POU4F3Q15319 338 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 ALG10Q5BKT4 473 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 PSAPL1Q6NUJ1 521 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 URM1Q9BTM9 101 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 SEC14L2O76054 403 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 HLA-EP13747 358 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 CHRFAM7AQ494W8 412 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 VITQ6UXI7 678 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM217AQ8IXS0 508 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 C7orf57Q8NEG2 295 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
SMARCA4-207ENST00000541122 MYH7P12883 1935 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 A0A1W2PQ45 241 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 A0A1W2PQY0 241 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 PRAMEF2O60811 474 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 HAPLN1P10915 354 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 GP1BBP13224 206 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 RAB11BQ15907 218 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 SPIN3Q5JUX0 258 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 MANEALQ5VSG8 457 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 RGMBQ6NW40 437 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 PXKQ7Z7A4 578 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 TMEM174Q8WUU8 243 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM46BQ96A09 425 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 METTL2AQ96IZ6 378 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 COQ3Q9NZJ6 369 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 B4GALT6Q9UBX8 382 aa14.27□□□□□ -0.12
SMARCA4-207ENST00000541122 ANHXE9PGG2 379 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 ERVK-21P61565 698 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 GPR17Q13304 367 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 AADACL4Q5VUY2 407 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 SSX6Q7RTT6 188 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 ADAMTS16Q8TE57 1224 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 SLC6A7Q99884 636 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 Q9Y3F1 56 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 KLK4Q9Y5K2 254 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 C1orf226A1L170 272 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 GABARAPO95166 117 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 SNAPINO95295 136 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 LRRC28Q86X40 367 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 TRAM1L1Q8N609 369 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 SCGB1C1Q8TD33 95 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 TMEM19Q96HH6 336 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 MFFQ9GZY8 342 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 RXFP3Q9NSD7 469 aa14.27□□□□□ -0.13
SMARCA4-207ENST00000541122 ACOT7O00154 380 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms