RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 NUDT8Q8WV74 236 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ADIPOR1Q96A54 375 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TP53INP1Q96A56 240 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ESAMQ96AP7 390 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CTHRC1Q96CG8 243 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 CFAP36Q96G28 342 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TMEM41AQ96HV5 264 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 UBXN10Q96LJ8 280 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RILPQ96NA2 401 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ZFP3Q96NJ6 502 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 GNRHR2Q96P88 292 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TRIB1Q96RU8 372 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TUBA1CQ9BQE3 449 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 PELOQ9BRX2 385 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 YIPF4Q9BSR8 244 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SFXN3Q9BWM7 321 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ERVK-6Q9BXR3 956 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RHOJQ9H4E5 214 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RPF2Q9H7B2 306 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 ZNF395Q9H8N7 513 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 CNOT10Q9H9A5 744 aaKnown RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 VIPAS39Q9H9C1 493 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SMYD2Q9NRG4 433 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 MS4A12Q9NXJ0 267 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 WWOXQ9NZC7 414 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.66□□□□□ -1.34
YBX3-209ENST00000540747 CLCF1Q9UBD9 225 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 RNF14Q9UBS8 474 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 SNX12Q9UMY4 172 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ERVK-19Q9WJR5 959 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 TSC22D4Q9Y3Q8 395 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 ASB4Q9Y574 426 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 NPFFR2Q9Y5X5 522 aa6.66□□□□□ -1.34
YBX3-209ENST00000540747 USF3Q68DE3 2245 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 CUBNO60494 3623 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 A0A0A6YYD5 115 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 A0A1W2PR48 441 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 ERICH4A6NGS2 130 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 E7ESA3 106 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TP53I11O14683 189 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 ARHGEF9O43307 516 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 HCRTR2O43614 444 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TMPRSS11DO60235 418 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 EEDO75530 441 aaKnown RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 TNFSF13O75888 250 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 RCBTB2O95199 551 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TGFB1P01137 390 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SLC35E2BP0CK96 405 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SLC35E2P0CK97 266 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TMIGD3P0DMS9 266 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 S1PR1P21453 382 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SSTR4P31391 388 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 CCKARP32238 428 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 BSGP35613 385 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 CASP3P42574 277 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SSR2P43308 183 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 POU4F1Q01851 419 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 IRF8Q02556 426 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SLAMF1Q13291 335 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 ZNF267Q14586 743 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 FASTKD3Q14CZ7 662 aaKnown RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 MORF4L2Q15014 288 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 POU4F3Q15319 338 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 ZKSCAN8Q15776 578 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 AP5B1Q2VPB7 878 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 PAGE2BQ5JRK9 111 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 WIPI1Q5MNZ9 446 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 OR4C11Q6IEV9 310 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 FRA10AC1Q70Z53 315 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TAOK1Q7L7X3 1001 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SLC29A4Q7RTT9 530 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 GPR180Q86V85 440 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 GPSM1Q86YR5 675 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 TAGAPQ8N103 731 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 PDIK1LQ8N165 341 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 RNF175Q8N4F7 328 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SPATA6LQ8N4H0 392 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SIMC1Q8NDZ2 872 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 FAM83FQ8NEG4 500 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 C17orf47Q8NEP4 570 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 SLC44A1Q8WWI5 657 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 DIO2Q92813 273 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 HGDQ93099 445 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 ABTB1Q969K4 478 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 CMTM7Q96FZ5 175 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 RBM18Q96H35 190 aaKnown RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 JSRP1Q96MG2 331 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 GAL3ST4Q96RP7 486 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 OSBPL9Q96SU4 736 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 NAP1L3Q99457 506 aaPredicted RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 RBM24Q9BX46 236 aaKnown RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 PHACTR1Q9C0D0 580 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 OR2B2Q9GZK3 357 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 OR51B5Q9H339 312 aa6.65□□□□□ -1.34
YBX3-209ENST00000540747 DDX31Q9H8H2 851 aaKnown RBP6.65□□□□□ -1.34
YBX3-209ENST00000540747 CXorf21Q9HAI6 301 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms