RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 KDM4EB2RXH2 506 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CCDC188H7C350 402 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 PRKRAO75569 313 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 TMIGD3P0DMS9 266 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 SSTR1P30872 391 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 SSTR4P31391 388 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CASP3P42574 277 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CPA2P48052 419 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 RPS13P62277 151 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 EEF1A1P68104 462 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CUL3Q13618 768 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ZKSCAN8Q15776 578 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 WIPI1Q5MNZ9 446 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 GRTP1Q5TC63 336 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 EEF1A1P5Q5VTE0 462 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 TMEM64Q6YI46 380 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CYS1Q717R9 158 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ISCA2Q86U28 154 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 NUDT13Q86X67 352 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 P3H2Q8IVL5 708 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 CTAGE3PQ8IX95 158 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 GALNT12Q8IXK2 581 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ZFP3Q96NJ6 502 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 TM9SF2Q99805 663 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 SFXN3Q9BWM7 321 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 UGT2B28Q9BY64 529 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 OR10A5Q9H207 317 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 UBQLN3Q9H347 655 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ACBD3Q9H3P7 528 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 DDX31Q9H8H2 851 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 SMYD2Q9NRG4 433 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 JKAMPQ9P055 326 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 EIF3LQ9Y262 564 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ASB4Q9Y574 426 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 ZNF469Q96JG9 3925 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-211ENST00000540408 A0A1W2PR48 441 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CXorf49A8MYA2 514 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-211ENST00000540408 H0YIV9 168 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 GNB5O14775 395 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 KERAO60938 352 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 LTA4HP09960 611 aaKnown RBP11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CRABP2P29373 138 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 PAFAH1B1P43034 410 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 NAGLUP54802 743 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 DIO3P55073 304 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CALCOCO2Q13137 446 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CBLBQ13191 982 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 POU4F3Q15319 338 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 EIPR1Q53HC9 387 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 BICRALQ6AI39 1079 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 TIGD3Q6B0B8 471 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 OR52E8Q6IFG1 317 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 MRM1Q6IN84 353 aaKnown RBP11.4□□□□□ -0.58
COPS7A-211ENST00000540408 ENPP6Q6UWR7 440 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 C3orf62Q6ZUJ4 267 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 LUZP2Q86TE4 346 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 RNF175Q8N4F7 328 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 ZNF441Q8N8Z8 693 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 OR7G1Q8NGA0 311 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 OR4K14Q8NGD5 310 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 UBTD2Q8WUN7 234 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 SMPDL3BQ92485 455 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 DTNBP1Q96EV8 351 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 SMR3AQ99954 134 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CXorf21Q9HAI6 301 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 SAYSD1Q9NPB0 183 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 PSD3Q9NYI0 1048 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 FETUBQ9UGM5 382 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 CFL2Q9Y281 166 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 SNX24Q9Y343 169 aa11.4□□□□□ -0.58
COPS7A-211ENST00000540408 ACANP16112 2415 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 MPDZO75970 2070 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 A0A0A6YYD5 115 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 TCRBV9S1A1TA0A576 114 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 SH3D21A4FU49 640 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 WASHC1A8K0Z3 465 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 UBXN8O00124 270 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 EIF3HO15372 352 aaKnown RBP eCLIP11.39□□□□□ -0.59
COPS7A-211ENST00000540408 UGDHO60701 494 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 EEDO75530 441 aaKnown RBP11.39□□□□□ -0.59
COPS7A-211ENST00000540408 CBR3O75828 277 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 AIFM1O95831 613 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 CLPSP04118 112 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 HRGP04196 525 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 HEXAP06865 529 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 GFAPP14136 432 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 CPN1P15169 458 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 NAGAP17050 411 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 CD53P19397 219 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 ABCD3P28288 659 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 BSGP35613 385 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 FUT7Q11130 342 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 GAB1Q13480 694 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 SLMAPQ14BN4 828 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms