RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ABT1Q9ULW3 272 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 CCL26Q9Y258 94 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 GSTK1Q9Y2Q3 226 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 C17orf113A0A1B0GUU1 675 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PRAMEF27A3QJZ7 478 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 SLC28A2O43868 658 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 LILRB3O75022 631 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 LRG1P02750 347 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CSF2P04141 144 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 GAAP10253 952 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PRKCAP17252 672 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 SYN1P17600 705 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 GSTM3P21266 225 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PTBP1P26599 531 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH13-204ENST00000539548 NNMTP40261 264 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CCT3P49368 545 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 SMSP52788 366 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 RPS25P62851 125 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 GALK2Q01415 458 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CAMK2BQ13554 666 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 TIGD3Q6B0B8 471 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CD200R1LQ6Q8B3 271 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 MRGPREQ86SM8 312 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PLA2G15Q8NCC3 412 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 OR4K5Q8NGD3 323 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TMEM163Q8TC26 289 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ENKURQ8TC29 256 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TM9SF4Q92544 642 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 COQ10AQ96MF6 247 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 GON7Q9BXV9 100 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 MS4A8Q9BY19 250 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ZDHHC5Q9C0B5 715 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ZCCHC2Q9C0B9 1178 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 ABCG4Q9H172 646 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 OR2AG1Q9H205 316 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 SYNDIG1Q9H7V2 258 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ACOXLQ9NUZ1 547 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 FBXW2Q9UKT8 454 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 CARD8Q9Y2G2 431 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 LRRK1Q38SD2 2015 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TRDV1A0A1B0GX56 115 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 PRODHO43272 600 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 PROM1O43490 865 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 TGM5O43548 720 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SLC34A2O95436 690 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SOD1P00441 154 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 EPHX1P07099 455 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 TYRP14679 529 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 HOXD10P28358 340 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 ERP29P30040 261 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 GABRA5P31644 462 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 CCL23P55773 120 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 GNG2P59768 71 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 HOXC5Q00444 222 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 UBE3AQ05086 875 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 HSPB3Q12988 150 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 MLC1Q15049 377 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 GPR19Q15760 415 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SNAPC1Q16533 368 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SYPL1Q16563 259 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SNAP47Q5SQN1 464 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 OR2G6Q5TZ20 316 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 TRMT11Q7Z4G4 463 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 PDZD3Q86UT5 571 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 TRAPPC5Q8IUR0 188 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 PEX5LQ8IYB4 626 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 MORN4Q8NDC4 146 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 DUSP18Q8NEJ0 188 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 VN1R2Q8NFZ6 395 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 OR52P1PQ8NH57 321 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 PXYLP1Q8TE99 480 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 UBASH3BQ8TF42 649 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 CYB5D2Q8WUJ1 264 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 ZBED6CLQ96FA7 236 aaPredicted RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 DTD2Q96FN9 168 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 LINC00615Q96LM1 132 aaPredicted RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 QRFPRQ96P65 431 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 F2RL3Q96RI0 385 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 SERHL2Q9H4I8 314 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 SPHK2Q9NRA0 654 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 MAN2C1Q9NTJ4 1040 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 ACSS1Q9NUB1 689 aaPredicted RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 SAGE1Q9NXZ1 904 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 P2RX2Q9UBL9 471 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 NDRG2Q9UN36 371 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 YARS2Q9Y2Z4 477 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 EXOSC1Q9Y3B2 195 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 NOTOA8MTQ0 251 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 M0R3H8 397 aa9.13□□□□□ -0.95
CDH13-204ENST00000539548 RTCAO00442 366 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 POP7O75817 140 aaKnown RBP9.13□□□□□ -0.95
CDH13-204ENST00000539548 PAPLNO95428 1278 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms