RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FASLGP48023 281 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 POU3F4P49335 361 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 FGL2Q14314 439 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 HMBOX1Q6NT76 420 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SYCE2Q6PIF2 218 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 C17orf99Q6UX52 265 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 DCDC5Q6ZRR9 648 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 TMEM151BQ8IW70 566 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF675Q8TD23 568 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SCGB1C1Q8TD33 95 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 DOK4Q8TEW6 326 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GDE1Q9NZC3 331 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 H7C417 338 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PHYHO14832 338 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GTF2F2P13984 249 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 CLDN8P56748 225 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GTF2IRD2BQ6EKJ0 949 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 HMGN2P46Q86SG4 172 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 TSPAN33Q86UF1 283 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GTF2IRD2Q86UP8 949 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PELI2Q9HAT8 420 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 EXTL2Q9UBQ6 330 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 ICKQ9UPZ9 632 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 ENTPD2Q9Y5L3 495 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 POLR1CO15160 346 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 EEDO75530 441 aaKnown RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 ALDOAP04075 364 aaKnown RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PYCR1P32322 319 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 RPS26P62854 115 aaKnown RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SRYQ05066 204 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SLC10A2Q12908 348 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SERTAD2Q14140 314 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GNMTQ14749 295 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 LPAL2Q16609 132 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 CEACAM19Q7Z692 300 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 SEC14L1Q92503 715 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 FBXL3Q9UKT7 428 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PRAMEF26H0Y7S4 382 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 H3BSA7 217 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PTGESO14684 152 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 PLATP00750 562 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 BORCS6Q96GS4 357 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 ANHXE9PGG2 379 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 HTRA2O43464 458 aaPredicted RBP16.02■□□□□ 0.16
SCARB1-205ENST00000538291 DIRAS3O95661 229 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 MSX1P28360 303 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 KCNAB2Q13303 367 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 OR13C3Q8NGS6 347 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 OR2T4Q8NH00 348 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 CNN2Q99439 309 aaKnown RBP16.02■□□□□ 0.16
SCARB1-205ENST00000538291 H0YAE9 185 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 SNAPC5O75971 98 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 CRISP1P54107 249 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 ATAD3CQ5T2N8 411 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 TMPRSS12Q86WS5 348 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 ACVR1CQ8NER5 493 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 MFSD8Q8NHS3 518 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 CREB3L4Q8TEY5 395 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF442Q9H7R0 627 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 J3QRK9 145 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 M0QZQ0 153 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 FOLR3P41439 243 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 HS3ST5Q8IZT8 346 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 NELFAQ9H3P2 528 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 KCNIP1Q9NZI2 227 aa16.02■□□□□ 0.16
SCARB1-205ENST00000538291 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 TSPAN4O14817 238 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 MAGEA8P43361 318 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF829Q3KNS6 432 aaPredicted RBP16.02■□□□□ 0.15
SCARB1-205ENST00000538291 TMEM69Q5SWH9 247 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF761Q86XN6 746 aaPredicted RBP16.02■□□□□ 0.15
SCARB1-205ENST00000538291 CREB3L1Q96BA8 519 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 CDH20Q9HBT6 801 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 NUP50Q9UKX7 468 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ATXN7L1Q9ULK2 861 aaPredicted RBP16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ADAM18Q9Y3Q7 739 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF175Q9Y473 711 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 BORCS7-ASMTA0A0B4J1R7 106 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 A0A0G2JPF8 293 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 HNRNPCL3B7ZW38 293 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 TYROBPO43914 113 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 HNRNPCL4P0DMR1 293 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 MFSD13AQ14CX5 517 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 DEFB110Q30KQ9 67 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.02■□□□□ 0.15
SCARB1-205ENST00000538291 RPLP0P6Q8NHW5 317 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 FKBP10Q96AY3 582 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF285Q96NJ3 590 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 CRB3Q9BUF7 120 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF226Q9NYT6 803 aa16.02■□□□□ 0.15
SCARB1-205ENST00000538291 TRBV2A0A0J9YWF9 115 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 FMO6PO60774 539 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 HPRP00739 348 aa16.01■□□□□ 0.15
SCARB1-205ENST00000538291 ARSDP51689 593 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms