RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LINGO3P0C6S8 592 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 SDC1P18827 310 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 GCKP35557 465 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 SLC18A2Q05940 514 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 TBL3Q12788 808 aaKnown RBP6.79□□□□□ -1.32
MSH6-209ENST00000538136 KLF10Q13118 480 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 NCF4Q15080 339 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 MAPRE2Q15555 327 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 C3AR1Q16581 482 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 NKG7Q16617 165 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 COL28A1Q2UY09 1125 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 PRAMEF9Q5VWM5 478 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 OR56A3Q8NH54 315 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.79□□□□□ -1.324e-7■■■□□ 16.2
MSH6-209ENST00000538136 UTP23Q9BRU9 249 aaKnown RBP6.79□□□□□ -1.32
MSH6-209ENST00000538136 C1QTNF6Q9BXI9 259 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 ERVMER34-1Q9H9K5 563 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 SNX13Q9Y5W8 968 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 AKAP13Q12802 2813 aa6.79□□□□□ -1.32
MSH6-209ENST00000538136 CHD5Q8TDI0 1954 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GABRR3A8MPY1 467 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 STX16O14662 325 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 LILRB5O75023 590 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SAGP10523 405 aaPredicted RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 THRAP10827 490 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 IDO1P14902 403 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 RAB15P59190 212 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SLC14A1Q13336 389 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 FLOT2Q14254 428 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ARHGAP19Q14CB8 494 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 DECR1Q16698 335 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SPIN4Q56A73 249 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 CARD17Q5XLA6 110 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GRHL2Q6ISB3 625 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 TMPRSS12Q86WS5 348 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ZNF619Q8N2I2 560 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KDM8Q8N371 416 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ZNF321PQ8N8H1 164 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 OR4N2Q8NGD1 307 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 OR2T11Q8NH01 316 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 TMBIM1Q969X1 311 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GNRHR2Q96P88 292 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 LMF1Q96S06 567 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 MENTQ9BUN1 341 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 HES7Q9BYE0 225 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 OR51B6Q9H340 312 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GALNT9Q9HCQ5 603 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GMPR2Q9P2T1 348 aaKnown RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 ADAMTS9Q9P2N4 1935 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KIF26AQ9ULI4 1882 aaPredicted RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 KLHL33A6NCF5 533 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SCDO00767 359 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ERN1O75460 977 aaKnown RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 MATN1P21941 496 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ASMTP46597 345 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 EIF1AXP47813 144 aaKnown RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 STARP49675 285 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 LIM2P55344 173 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 NUP107P57740 925 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 NAA25Q14CX7 972 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 CARTPTQ16568 116 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 C1orf94Q6P1W5 598 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 C6orf120Q7Z4R8 191 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 FER1L6-AS2Q96M78 137 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SFXN2Q96NB2 322 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SLC46A1Q96NT5 459 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 OR2A5Q96R48 311 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ROGDIQ9GZN7 287 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 REEP4Q9H6H4 257 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 TPT1P8Q9HAU6 139 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 IGLV3-16A0A075B6K0 115 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SAC3D1A6NKF1 404 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 CLDN24A6NM45 220 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GPR75O95800 540 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 MNAT1P51948 309 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 MRPS22P82650 360 aaKnown RBP6.78□□□□□ -1.32
MSH6-209ENST00000538136 ZNF793Q6ZN11 406 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KRT73Q86Y46 540 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GCNT2Q8N0V5 402 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ARHGAP24Q8N264 748 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 GALNT16Q8N428 558 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SLC16A11Q8NCK7 471 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 PDPRQ8NCN5 879 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 NFKBIDQ8NI38 313 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KLHL6Q8WZ60 621 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 CD180Q99467 661 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 KCNS3Q9BQ31 491 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 SEMA4CQ9C0C4 833 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 NECTIN3Q9NQS3 549 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ARL8BQ9NVJ2 186 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 PPP4R1LQ9P1A2 415 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 LGALS13Q9UHV8 139 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 ANAPC1Q9H1A4 1944 aa6.78□□□□□ -1.32
MSH6-209ENST00000538136 C9orf172C9J069 976 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 COX4I1P13073 169 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 PRPS1L1P21108 318 aa6.77□□□□□ -1.33
MSH6-209ENST00000538136 TNFRSF8P28908 595 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms