RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MIA3Q5JRA6 1907 aa8.11□□□□□ -1.11
SRGAP1-202ENST00000537556 EEF1E1O43324 174 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 OIP5O43482 229 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GALR3O60755 368 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 RBBP9O75884 186 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PFKMP08237 780 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 HOXC4P09017 264 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 NR2F6P10588 404 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 RBMS1P29558 406 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PRDX3P30048 256 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SCNN1AP37088 669 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CDKN2CP42773 168 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CDH4P55283 916 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GMFBP60983 142 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 IL10RBQ08334 325 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 HTR4Q13639 388 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC22A10Q63ZE4 541 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF660Q6AZW8 331 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 LYPD4Q6UWN0 246 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 QSOX2Q6ZRP7 698 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 KLBQ86Z14 1044 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CARFQ8N187 725 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF561Q8N587 486 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM193BQ96PV7 902 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 IFT27Q9BW83 186 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM124BQ9H5Z6 455 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ATP13A1Q9HD20 1204 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 FZD3Q9NPG1 666 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SERHLQ9NQF3 203 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 MGAT4CQ9UBM8 478 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ACSL6Q9UKU0 697 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CHST2Q9Y4C5 530 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM221BA6H8Z2 402 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ARPC5O15511 151 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 LANCL1O43813 399 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SEMA7AO75326 666 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 RECQL4O94761 1208 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 EGFP01133 1207 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GP1BAP07359 652 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GNSP15586 552 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CNR1P21554 472 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 RFX3P48380 749 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF33AQ06730 810 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PEA15Q15121 130 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 VMACQ2NL98 169 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 MANEAQ5SRI9 462 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GCNT6Q5T4J0 391 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 DCUN1D3Q8IWE4 304 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 TP53INP2Q8IXH6 220 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 KLHDC8BQ8IXV7 354 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CMIPQ8IY22 773 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC44A3Q8N4M1 653 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 POMGNT2Q8NAT1 580 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CHFRQ96EP1 664 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CMTM3Q96MX0 182 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 MS4A4EQ96PG1 132 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 DMRTA2Q96SC8 542 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 NT5C1AQ9BXI3 368 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ISYNA1Q9NPH2 558 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CYSLTR2Q9NS75 346 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 DLGAP4Q9Y2H0 992 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 COL5A2P05997 1499 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 BRCA1P38398 1863 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 M0R129 80 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ENTPD6O75354 484 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 AKR7A3O95154 331 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC34A2O95436 690 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 IFNA10P01566 189 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 HOXC6P09630 235 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GAAP10253 952 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ELK1P19419 428 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GABRA5P31644 462 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CLDN8P56748 225 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 RFTN2Q52LD8 501 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZRANB3Q5FWF4 1079 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 PIM3Q86V86 326 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 UNC93AQ86WB7 457 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 MISPQ8IVT2 679 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SYT14Q8NB59 555 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM185AQ8NFB2 350 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 OR10H5Q8NGA6 315 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 OR5M3Q8NGP4 307 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 OR5J2Q8NH18 312 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 NUDT8Q8WV74 236 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 HSD17B8Q92506 261 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 SENP5Q96HI0 755 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 TPD52L3Q96J77 140 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 ZNF382Q96SR6 550 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 FICDQ9BVA6 458 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 GGACTQ9BVM4 153 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 POLDIP3Q9BY77 421 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 NRBP2Q9NSY0 501 aa8.1□□□□□ -1.11
SRGAP1-202ENST00000537556 CFAP97Q9P2B7 532 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms