RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SPNP16150 400 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 MMP11P24347 488 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 SSR2P43308 183 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ANXA11P50995 505 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 EFNB1P98172 346 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 SLC9A5Q14940 896 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 WSCD2Q2TBF2 565 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 PIP5KL1Q5T9C9 394 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 WDR53Q7Z5U6 358 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 SFTPA1Q8IWL2 248 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 SCAIQ8N9R8 606 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 OR4K5Q8NGD3 323 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 FERD3LQ96RJ6 166 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 C17orf62Q9BQA9 187 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 TEX101Q9BY14 249 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 DIMT1Q9UNQ2 313 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 CKAP5Q14008 2032 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 HTR3EA5X5Y0 456 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MAN2B1O00754 1011 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 ASNA1O43681 348 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SERPIND1P05546 499 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MAGP20916 626 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 CDK5Q00535 292 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 ENTPD8Q5MY95 495 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 TMEM64Q6YI46 380 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SZRD1Q7Z422 152 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 PHC2Q8IXK0 858 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 TP53I13Q8NBR0 393 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 OR2A1Q8NGT9 310 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MIR1-1HGQ9H1L0 117 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SMURF1Q9HCE7 757 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 TESQ9UGI8 421 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SSR3Q9UNL2 185 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 IGKV1-8A0A0C4DH67 115 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 HYKKA2RU49 373 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 M0R3H8 397 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MYL12BO14950 172 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 PRKYO43930 277 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 EPHX1P07099 455 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 GSTM3P21266 225 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 NTSP30990 170 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 IL12RB1P42701 662 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MAGEA10P43363 369 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 KHKP50053 298 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 NCBP2P52298 156 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 TAS2R38P59533 333 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 RUNX1T1Q06455 604 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 GINS1Q14691 196 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SYT14P1Q58G82 188 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 FAM78AQ5JUQ0 283 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 ADCK2Q7Z695 626 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 COMTD1Q86VU5 262 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MORN4Q8NDC4 146 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 SETD6Q8TBK2 473 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 BBS4Q96RK4 519 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 BARHL1Q9BZE3 327 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 KCNK12Q9HB15 430 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 MAN2C1Q9NTJ4 1040 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 ERVK13-1Q9NX77 482 aa15.13■□□□□ 0.01
CHMP1A-202ENST00000535997 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 A0A0G2JN53 185 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 A0A0G2JPF8 293 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SLC35F4A4IF30 521 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 HNRNPCL2B2RXH8 293 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 HNRNPCL3B7ZW38 293 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 CASC3O15234 703 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 RGS5O15539 181 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 DYRK3O43781 588 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 TPST2O60704 377 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 GUCY1B2O75343 617 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 HNRNPCL4P0DMR1 293 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 RAB28P51157 221 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 COPZ1P61923 177 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 DMPKQ09013 629 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 KLHL22Q53GT1 634 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 ZNF793Q6ZN11 406 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 BCDIN3DQ7Z5W3 292 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 IL17RDQ8NFM7 739 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 OR6T1Q8NGN1 323 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SUN3Q8TAQ9 357 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 TMCO6Q96DC7 493 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 LRR1Q96L50 414 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 PRRC1Q96M27 445 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 INSM2Q96T92 566 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 MUC22E2RYF6 1773 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 PPM1DO15297 605 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 RAB36O95755 333 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 TRIM23P36406 574 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 GJA8P48165 433 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SMSP52788 366 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 BNC1Q01954 994 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 ZIC1Q15915 447 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 PRAMEF8Q5VWM4 474 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 PRAMEF7Q5VXH5 474 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 TMC5Q6UXY8 1006 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 USP30Q70CQ3 517 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 IQCF1Q8N6M8 205 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 OR52I1Q8NGK6 324 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SFXN5Q8TD22 340 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms