RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PROK2Q9HC23 129 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SAYSD1Q9NPB0 183 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SMYD2Q9NRG4 433 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EIF3LQ9Y262 564 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 IKBKGQ9Y6K9 419 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NINQ8N4C6 2090 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 KDM4EB2RXH2 506 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 H0Y3Z8 333 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UBXN8O00124 270 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 AIFM1O95831 613 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 IL18BPO95998 194 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SSTR1P30872 391 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SSTR4P31391 388 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 E2F2Q14209 437 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZKSCAN8Q15776 578 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EIPR1Q53HC9 387 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NHSL2Q5HYW2 709 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 WIPI1Q5MNZ9 446 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GRTP1Q5TC63 336 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 LIPJQ5W064 366 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 BICRALQ6AI39 1079 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 LUZP2Q86TE4 346 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 P3H2Q8IVL5 708 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TMEM41AQ96HV5 264 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZFP3Q96NJ6 502 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GNRHR2Q96P88 292 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MCMBPQ9BTE3 642 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SFXN3Q9BWM7 321 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ACBD3Q9H3P7 528 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CFL2Q9Y281 166 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SNX24Q9Y343 169 aa11.86□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ACTL6AO96019 429 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 LTA4HP09960 611 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 BMP7P18075 431 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NT5EP21589 574 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CRABP2P29373 138 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CPOXP36551 454 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CASP3P42574 277 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PIK3CGP48736 1102 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DIO3P55073 304 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NKX6-1P78426 367 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ENPP6Q6UWR7 440 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ANGPTL8Q6UXH0 198 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CMC1Q7Z7K0 106 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 YRDCQ86U90 279 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ISL2Q96A47 359 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 WDYHV1Q96HA8 205 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UBXN10Q96LJ8 280 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TM9SF2Q99805 663 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UBQLN3Q9H347 655 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NDRG3Q9UGV2 375 aa11.85□□□□□ -0.51
TNFRSF1A-207ENST00000535958 VPS13CQ709C8 3753 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 A0A0A6YYD5 115 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 A0A1W2PR48 441 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EIF3HO15372 352 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TMPRSS11DO60235 418 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UGDHO60701 494 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EEDO75530 441 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ABCD3P28288 659 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SRYQ05066 204 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PLCXD2Q0VAA5 305 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CUL3Q13618 768 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FAM83EQ2M2I3 478 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TIGD3Q6B0B8 471 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 KLC3Q6P597 504 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 POMZP3Q6PJE2 187 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C3orf62Q6ZUJ4 267 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PPM1NQ8N819 430 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZNF441Q8N8Z8 693 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C9orf106Q8NAJ2 232 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FAM83FQ8NEG4 500 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR7G1Q8NGA0 311 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR4K14Q8NGD5 310 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SMPDL3BQ92485 455 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ATP6V1E2Q96A05 226 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ATOH8Q96SQ7 321 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SMR3AQ99954 134 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 BRINP2Q9C0B6 783 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DPH5Q9H2P9 285 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DDX31Q9H8H2 851 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms